API for simDNAmixtures
Simulate Forensic DNA Mixtures
| Global functions | |
|---|---|
| .YSTR_allele_tables_to_wide_references | Source code |
| .allele_tables_to_wide_references | Source code |
| .extract_repeat_length_by_locus_from_STRmix_kit | Source code |
| .get_allele_columns | Source code |
| .get_deg_starts_at | Source code |
| .init_results_directory | Source code |
| .many_genotypes_int_to_labels | Source code |
| .prepare_summaries | Source code |
| .read_STRmix_kit_stutters | Source code |
| .sample_many_founders | Source code |
| .validate_character | Source code |
| .validate_drop_model_settings | Source code |
| .validate_freqs | Man page Source code |
| .validate_integer | Source code |
| .validate_linkage_map | Source code |
| .validate_logical | Source code |
| .validate_numeric | Source code |
| .validate_pedigree | Man page Source code |
| .validate_sex_locus_freqs | Source code |
| .wide_YSTR_references_to_allele_tables | Source code |
| .wide_references_to_allele_tables | Source code |
| .write_mixture | Source code |
| .write_pedigree | Source code |
| .write_summaries | Source code |
| SMASH_to_wide_table | Man page Source code |
| add_expected_allelic_peak_height | Source code |
| add_expected_peak_height | Source code |
| allele_specific_stutter_model | Man page Source code |
| allele_specific_stutter_model_add_expected_stutter | Source code |
| bp_to_repeats | Source code |
| check_genotype_df | Source code |
| drop_model | Man page Source code |
| drop_model_build_expected_profile | Source code |
| drop_model_sample_dropouts | Source code |
| gamma_model | Man page Source code |
| gamma_model_build_expected_profile | Source code |
| get_SMASH_from_samples | Source code |
| get_allele_index | Source code |
| get_bare_mixture | Source code |
| get_empty_wide_table | Source code |
| get_knowns_as_reference_db | Source code |
| get_parameter_summary | Source code |
| get_reference_database | Source code |
| get_stutter_target | Source code |
| gf_configuration | Man page Source code |
| global_stutter_model | Man page Source code |
| global_stutter_model_add_expected_stutter | Source code |
| kits | Man page |
| log_normal_get_sample_name_suffix | Source code |
| log_normal_model | Man page Source code |
| log_normal_model_build_expected_profile | Source code |
| log_normal_model_sample_peak_heights | Source code |
| read_STRmix_kit_settings | Man page Source code |
| read_allele_freqs | Man page Source code |
| read_size_regression | Man page Source code |
| read_stutter_exceptions | Man page Source code |
| read_stutter_regression | Man page Source code |
| read_wide_table | Man page Source code |
| reorder_profile | Source code |
| repeats_to_bp | Source code |
| repeats_to_decimals | Source code |
| sample_LSAE | Man page Source code |
| sample_contributor_genotypes | Man page Source code |
| sample_drop_model | Man page Source code |
| sample_gamma_model | Man page Source code |
| sample_genotype | Man page Source code |
| sample_log_normal_model | Man page Source code |
| sample_log_normal_parameters | Man page Source code |
| sample_log_normal_stutter_variance | Man page Source code |
| sample_many_pedigree_genotypes | Man page Source code |
| sample_mixture_from_genotypes | Man page Source code |
| sample_mixtures | Man page Source code |
| sample_mixtures_fixed_parameters | Man page Source code |
| sample_mixtures_from_genotypes | Man page Source code |
| sample_offspring | Man page Source code |
| sample_pedigree_genotypes | Man page Source code |
| set_or_add_df_variable | Source code |
| stutter_type | Man page Source code |
| unpack_haplotypes | Source code |
| validate_log_normal_model_settings | Source code |
| write_knowns | Source code |
| write_knowns_as_reference_db | Source code |
