simctest: Safe Implementation of Monte Carlo Tests

Algorithms for the implementation and evaluation of Monte Carlo tests, as well as for their use in multiple testing procedures.

AuthorAxel Gandy <a.gandy@imperial.ac.uk> with contributions from Patrick Rubin-Delanchy <patrick.rubin-delanchy@imperial.ac.uk>, Georg Hahn <g.hahn11@imperial.ac.uk>, Dong Ding <dong.ding10@imperial.ac.uk>
Date of publication2017-03-23 13:02:37 UTC
MaintainerAxel Gandy <a.gandy@imperial.ac.uk>
LicenseGPL (>= 2)
Version2.5
http://www2.imperial.ac.uk/~agandy

View on CRAN

Man pages

confidenceLimits-methods: Methods for class 'mmctestres' and 'mmctest', Package...

confint-methods: Methods for Function run in Package 'simctest'

cont-methods: Methods for Function 'cont' in Package 'simctest'

getalgprecomp: Construct algorithms

getbounds-methods: Methods for Function getbounds in Package 'simctest'

getL-methods: Methods for Function getL in Package 'simctest'

getNumber-methods: Methods for Function 'cont' in class 'mmctestres', Package...

getSamples-methods: Methods for Function 'cont' in class 'mmctestres', Package...

getU-methods: Methods for Function getU in Package 'simctest'

hBH-methods: Method for class 'mcmtest', Package 'simctest'

hBonferroni-methods: Method for class 'mcmtest', Package 'simctest'

hPC-methods: Method for class 'mcmtest', Package 'simctest'

mcp: Function mcp in package 'simctest'

mcpres-class: Class "mcpres"

mctest: Sequential implementation of Monte Carlo tests with multiple...

mkdeltamid: Function mkdeltamid in Package 'simctest'

mmctest-class: Class "mmctest"

mmctest-methods: Methods for class 'mmctest', Package 'simctest'

mmctestres-class: Class "mmctestres"

mmctSampler-class: Class "mmctest"

mmctSamplerGeneric-class: Class "mmctSamplerGeneric"

mmctSampler-methods: Methods for class mmctSampler', Package 'simctest'

pEstimate-methods: Methods for class 'mmctestres' and 'mmctest', Package...

rejProb-methods: Methods for class 'mmctestres' and 'mmctest', Package...

run-methods: Methods for Function run in Package 'simctest'

sampalg-class: Class "sampalg"

sampalgonthefly-class: Class "sampalgonthefly"

sampalgontheflyres-class: Class "sampalgontheflyres"

sampalgPrecomp-class: Class "sampalgPrecomp"

sampalgres-class: Class "sampalgres"

simctest: Sequential implementation of Monte Carlo tests

summary.mmctestres-methods: Methods for class 'mmctestres' and 'mmctest', Package...

testResult-methods: Methods for class 'mmctestres' and 'mmctest', Package...

Functions

confidenceLimits Man page
confidenceLimits-methods Man page
confidenceLimits,mmctest-method Man page
confidenceLimits,mmctestres-method Man page
confint Man page
confint,ANY,ANY-method Man page
confint-methods Man page
confint,sampalgres,missing-method Man page
cont Man page
contalg,sampalgontheflyres-method Man page
contalg,sampalgres-method Man page
cont-methods Man page
cont,mmctestres-method Man page
cont,sampalgontheflyres-method Man page
cont,sampalgres-method Man page
getalgonthefly Man page
getalgprecomp Man page
getbounds Man page
getbounds-methods Man page
getbounds,sampalgontheflyres-method Man page
getbounds,sampalgres-method Man page
getL Man page
getL-methods Man page
getL,sampalgPrecomp-method Man page
getNumber Man page
getNumber-methods Man page
getNumber,mmctSamplerGeneric-method Man page
getNumber,mmctSampler-method Man page
getSamples Man page
getSamples-methods Man page
getSamples,mmctSamplerGeneric-method Man page
getSamples,mmctSampler-method Man page
getU Man page
getU-methods Man page
getU,sampalgPrecomp-method Man page
hBH Man page
hBH-methods Man page
hBonferroni Man page
hBonferroni-methods Man page
hPC Man page
hPC-methods Man page
J Man page
Jnarrow Man page
Jstar Man page
mcp Man page
mcpres-class Man page
mctest Man page
mctest.RL Man page
mctest.simctest Man page
mkdeltamid Man page
mmctest Man page
mmctest-class Man page
mmctest-methods Man page
mmctestres-class Man page
mmctSampler Man page
mmctSampler-class Man page
mmctSamplerGeneric-class Man page
mmctSampler-methods Man page
pEstimate Man page
pEstimate-methods Man page
pEstimate,mmctest-method Man page
pEstimate,mmctestres-method Man page
print.mctestres Man page
rejProb Man page
rejProb-methods Man page
rejProb,mmctest-method Man page
rejProb,mmctestres-method Man page
run Man page
run-methods Man page
run,mmctest,mmctSamplerGeneric-method Man page
run,sampalgonthefly,ANY-method Man page
run,sampalgPrecomp,ANY-method Man page
sampalg-class Man page
sampalgonthefly Man page
sampalgonthefly-class Man page
sampalgontheflyres-class Man page
sampalgPrecomp Man page
sampalgPrecomp-class Man page
sampalgres-class Man page
show,mcpres-method Man page
show,mmctestres-method Man page
show,sampalgres-method Man page
simctest Man page
summary.mmctestres Man page
summary.mmctestres-methods Man page
summary.mmctestres,mmctest-method Man page
summary.mmctestres,mmctestres-method Man page
testResult Man page
testResult-methods Man page
testResult,mmctest-method Man page
testResult,mmctestres-method Man page

Files

simctest
simctest/inst
simctest/inst/CITATION
simctest/inst/NEWS.Rd
simctest/inst/doc
simctest/inst/doc/simctest-intro.R
simctest/inst/doc/simctest-mctest-intro.pdf
simctest/inst/doc/simctest-mmctest-intro.pdf
simctest/inst/doc/simctest-mctest-intro.R
simctest/inst/doc/simctest-intro.pdf
simctest/inst/doc/simctest-intro.Rnw
simctest/inst/doc/simctest-mmctest-intro.R
simctest/inst/doc/simctest-mmctest-intro.Rnw
simctest/inst/doc/simctest-mctest-intro.Rnw
simctest/src
simctest/src/simctest.c
simctest/src/init.c
simctest/NAMESPACE
simctest/R
simctest/R/simctest.R simctest/R/mmctest.R simctest/R/mcp.R simctest/R/multithresh.R
simctest/vignettes
simctest/vignettes/papers.bib
simctest/vignettes/simctest-intro.Rnw
simctest/vignettes/simctest-mmctest-intro.Rnw
simctest/vignettes/simctest-mctest-intro.Rnw
simctest/MD5
simctest/build
simctest/build/vignette.rds
simctest/DESCRIPTION
simctest/man
simctest/man/mcpres-class.Rd simctest/man/mmctest-class.Rd simctest/man/mmctSamplerGeneric-class.Rd simctest/man/pEstimate-methods.Rd simctest/man/getL-methods.Rd simctest/man/mmctSampler-class.Rd simctest/man/mmctest-methods.Rd simctest/man/sampalg-class.Rd simctest/man/sampalgonthefly-class.Rd simctest/man/mmctestres-class.Rd simctest/man/run-methods.Rd simctest/man/hPC-methods.Rd simctest/man/sampalgontheflyres-class.Rd simctest/man/getU-methods.Rd simctest/man/rejProb-methods.Rd simctest/man/testResult-methods.Rd simctest/man/mkdeltamid.Rd simctest/man/getbounds-methods.Rd simctest/man/confint-methods.Rd simctest/man/mctest.Rd simctest/man/mcp.Rd simctest/man/hBH-methods.Rd simctest/man/sampalgPrecomp-class.Rd simctest/man/getNumber-methods.Rd simctest/man/summary.mmctestres-methods.Rd simctest/man/simctest.Rd simctest/man/mmctSampler-methods.Rd simctest/man/confidenceLimits-methods.Rd simctest/man/hBonferroni-methods.Rd simctest/man/getalgprecomp.Rd simctest/man/cont-methods.Rd simctest/man/sampalgres-class.Rd simctest/man/getSamples-methods.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.