sme: Smoothing-splines Mixed-effects Models
Version 0.8

A package for fitting smoothing-splines mixed-effects models to replicated functional data sets.

AuthorMaurice Berk [aut, cre]
Date of publication2013-08-02 17:16:17
MaintainerMaurice Berk <maurice@mauriceberk.com>
LicenseGPL (>= 3)
Version0.8
URL http://www2.imperial.ac.uk/~mab201
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("sme")

Popular man pages

AICc: The corrected AIC
BICn: An alternative BIC for longitudinal models
plotSmeDiagnostic: Diagnostic plot of the residuals for a fitted...
sme: Smoothing-splines mixed-effects models
sme.data.frame: Smoothing-splines mixed-effects model fit(s) from a...
sme.list: Carry out mulitple independent smoothing-splines...
smeObject: Fitted sme Object
See all...

All man pages Function index File listing

Man pages

AICc: The corrected AIC
BICn: An alternative BIC for longitudinal models
getRoughnessMatrix: Extract the roughness matrix used in an SME model fit
inflammatory: Example gene transcript from an experiment on children...
MTB: Ten example gene transcripts from an experiment investigating...
plot.sme: Visualisation of smoothing-splines mixed-effects models
plotSmeDiagnostic: Diagnostic plot of the residuals for a fitted...
plotSmeModel: Visualisation of a fitted smoothing-splines mixed-effects...
plotSmeRaw: Visualisation of raw data for a smoothing-splines...
sme: Smoothing-splines mixed-effects models
sme.data.frame: Smoothing-splines mixed-effects model fit(s) from a...
sme.list: Carry out mulitple independent smoothing-splines...
smeObject: Fitted sme Object

Functions

AICc Man page Source code
BICn Man page Source code
BICn.sme Source code
MTB Man page
blockDiagMat Source code
getRoughnessMatrix Man page Source code
incidenceMatrix Source code
inflammatory Man page
logLik.sme Source code
plot.sme Man page Source code
plotSmeDiagnostic Man page Source code
plotSmeModel Man page Source code
plotSmeRaw Man page Source code
roughnessMatrix Source code
rstandard.sme Source code
sme Man page Source code
sme.data.frame Man page Source code
sme.default Man page Source code
sme.list Man page Source code
smeObject Man page
vcov.sme Source code

Files

inst
inst/doc
inst/doc/Tutorial.pdf
inst/doc/Tutorial.Rnw
tests
tests/sme.Rout.save
tests/sme.R
src
src/BlockDiagonalMatrix.c
src/LinearAlgebra.c
src/Makevars
src/RoughnessMatrix.c
src/LinearAlgebra.h
src/Matrix.h
src/NelderMead.h
src/Matrix.c
src/Utility.h
src/IncidenceMatrix.c
src/IncidenceMatrix.h
src/Utility.c
src/SME.h
src/SME.c
src/RoughnessMatrix.h
src/NelderMead.c
src/Vector.c
src/BlockDiagonalMatrix.h
src/Vector.h
NAMESPACE
data
data/MTB.rda
data/inflammatory.rda
R
R/sme.R
vignettes
vignettes/sme.bib
vignettes/Tutorial.Rnw
MD5
DESCRIPTION
ChangeLog
man
man/inflammatory.Rd
man/smeObject.Rd
man/plotSmeRaw.Rd
man/MTB.Rd
man/plot.sme.Rd
man/AICc.Rd
man/sme.data.frame.Rd
man/plotSmeModel.Rd
man/getRoughnessMatrix.Rd
man/sme.list.Rd
man/plotSmeDiagnostic.Rd
man/BICn.Rd
man/sme.Rd
sme documentation built on May 20, 2017, 12:57 a.m.

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

Please suggest features or report bugs in the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.