sme: Smoothing-splines Mixed-effects Models

A package for fitting smoothing-splines mixed-effects models to replicated functional data sets.

Author
Maurice Berk [aut, cre]
Date of publication
2013-08-02 17:16:17
Maintainer
Maurice Berk <maurice@mauriceberk.com>
License
GPL (>= 3)
Version
0.8
URLs

View on CRAN

Man pages

AICc
The corrected AIC
BICn
An alternative BIC for longitudinal models
getRoughnessMatrix
Extract the roughness matrix used in an SME model fit
inflammatory
Example gene transcript from an experiment on children...
MTB
Ten example gene transcripts from an experiment investigating...
plot.sme
Visualisation of smoothing-splines mixed-effects models
plotSmeDiagnostic
Diagnostic plot of the residuals for a fitted...
plotSmeModel
Visualisation of a fitted smoothing-splines mixed-effects...
plotSmeRaw
Visualisation of raw data for a smoothing-splines...
sme
Smoothing-splines mixed-effects models
sme.data.frame
Smoothing-splines mixed-effects model fit(s) from a...
sme.list
Carry out mulitple independent smoothing-splines...
smeObject
Fitted sme Object

Files in this package

sme
sme/inst
sme/inst/doc
sme/inst/doc/Tutorial.pdf
sme/inst/doc/Tutorial.Rnw
sme/tests
sme/tests/sme.Rout.save
sme/tests/sme.R
sme/src
sme/src/BlockDiagonalMatrix.c
sme/src/LinearAlgebra.c
sme/src/Makevars
sme/src/RoughnessMatrix.c
sme/src/LinearAlgebra.h
sme/src/Matrix.h
sme/src/NelderMead.h
sme/src/Matrix.c
sme/src/Utility.h
sme/src/IncidenceMatrix.c
sme/src/IncidenceMatrix.h
sme/src/Utility.c
sme/src/SME.h
sme/src/SME.c
sme/src/RoughnessMatrix.h
sme/src/NelderMead.c
sme/src/Vector.c
sme/src/BlockDiagonalMatrix.h
sme/src/Vector.h
sme/NAMESPACE
sme/data
sme/data/MTB.rda
sme/data/inflammatory.rda
sme/R
sme/R/sme.R
sme/vignettes
sme/vignettes/sme.bib
sme/vignettes/Tutorial.Rnw
sme/MD5
sme/DESCRIPTION
sme/ChangeLog
sme/man
sme/man/inflammatory.Rd
sme/man/smeObject.Rd
sme/man/plotSmeRaw.Rd
sme/man/MTB.Rd
sme/man/plot.sme.Rd
sme/man/AICc.Rd
sme/man/sme.data.frame.Rd
sme/man/plotSmeModel.Rd
sme/man/getRoughnessMatrix.Rd
sme/man/sme.list.Rd
sme/man/plotSmeDiagnostic.Rd
sme/man/BICn.Rd
sme/man/sme.Rd