smooth_deparse: Deparse

In smoothy: Automatic Estimation of the Most Likely Drug Combination using Smooth Algorithm

Deparse

Description

Transforms the Data with a Row by Date to a Row by Individual.

Usage

smooth_deparse(id, day, treatment)

Arguments

id	Unique identifier of the patient.
day	Day of the treatment.
treatment	A character vector representing the type of treatment given to each patient.

Value

A data.frame with the following structure:

id

A character vector representing the unique identifier for each patient.

start_date

Start date of the treatment.

end_date

End date of the treatment.

treatment

A character vector representing the type of treatment given to each patient.

Examples

library(smoothy)
library(dplyr)

data(drugstreatment)

my_data <- filter(drugstreatment, id == "01f13c15-d9f1-4106-a04f-976c457edd0a")

structured_df <- smooth_parse(
  id = my_data$id,
  start_date = my_data$start_date,
  end_date = my_data$end_date,
  drug = my_data$drug,
  study_from = "1970-01-01",
  study_to = "1975-01-01"
)

head(structured_df)

id = structured_df$id
treatment = structured_df$treatment
day = structured_df$day
N = structured_df$N
width = 61

smoothed <- smooth_algorithm(id = id, treatment = treatment, day = day, N = N, width = width)

head(smoothed)

deparsed_treatment <- smooth_deparse(smoothed$id, smoothed$day, smoothed$treatment)
deparsed_smothed <- smooth_deparse(smoothed$id, smoothed$day, smoothed$smoothed_treatment)

smoothy documentation built on Aug. 11, 2023, 9:06 a.m.