summary.spAbund: Methods for spAbund Object

In spAbundance: Univariate and Multivariate Spatial Modeling of Species Abundance

Methods for spAbund Object

Description

Methods for extracting information from fitted univariate spatially-explicit GLMMs (spAbund).

Usage

## S3 method for class 'spAbund'
summary(object, quantiles = c(0.025, 0.5, 0.975), 
        digits = max(3L, getOption("digits") - 3L), ...)
## S3 method for class 'spAbund'
print(x, ...)
## S3 method for class 'spAbund'
plot(x, param, density = TRUE, ...)

Arguments

object, x	object of class spAbund.
quantiles	for summary, posterior distribution quantiles to compute.
digits	for summary, number of digits to report.
param	parameter name for which to generate a traceplot. Valid names are "beta", "beta.star", "sigma.sq.mu", "tau.sq", "theta".
density	logical value indicating whether to also generate a density plot for each parameter in addition to the MCMC traceplot.
...	currently no additional arguments

Details

A set of standard extractor functions for fitted model objects of class spAbund, including methods to the generic functions print, summary, plot.

Value

No return value, called to display summary information of a spAbund object.

spAbundance documentation built on Oct. 6, 2024, 1:08 a.m.