spMC: Continuous-Lag Spatial Markov Chains
Version 0.3.8

A set of functions is provided for 1) the stratum lengths analysis along a chosen direction, 2) fast estimation of continuous lag spatial Markov chains model parameters and probability computing (also for large data sets), 3) transition probability maps and transiograms drawing, 4) simulation methods for categorical random fields.

Browse man pages Browse package API and functions Browse package files

AuthorLuca Sartore
Date of publication2016-10-22 12:17:39
MaintainerLuca Sartore <drwolf85@gmail.com>
LicenseGPL (>= 2)
Version0.3.8
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("spMC")

Man pages

ACM: ACM Data
boxplot.lengths: Stratum Lengths Boxplot
contour.pemt: Display Contours with Multi-directional Transiograms
density.lengths: Empirical Densities Estimation of Stratum Lengths
embed_MC: Transition Probabilities Estimation for Embedded Markov Chain
getlen: Estimation of Stratum Lengths for Embedded Markov Chain
hist.lengths: Histograms of Stratum Lengths for Each Observed Category
image.multi_tpfit: Images with Multidimensional Transiograms
image.pemt: Images with Multi-directional Transiograms
is.lengths: Object test for lengths class
is.multi_tpfit: Object test for multi_tpfit class
is.multi_transiogram: Object test for multi_transiogram class
is.pemt: Images with Multi-direct'ional Transiograms
is.tpfit: Object test for tpfit class
is.transiogram: Object test for transiogram class
mixplot: Plot of Multiple One-dimensional Transiograms
mlen: Mean Length Estimation for Embedded Markov Chain
multi_tpfit: Multidimensional Model Parameters Estimation
multi_tpfit_ils: Iterated Least Squares Method for Multidimensional Model...
multi_tpfit_me: Maximum Entropy Method for Multidimensional Model Parameters...
multi_tpfit_ml: Mean Length Method for Multidimensional Model Parameters...
pemt: Multi-directional Transiograms Estimation
persp.multi_tpfit: Perspective Plots with Multidimensional Transiograms
persp.pemt: Perspective Plots with Multi-directional Transiograms
plot.density.lengths: Plot Empirical Densities Estimates of Stratum Lengths
plot.hist.lengths: Plot Histograms of Stratum Lengths
plot.lengths: Plot Stratum Lengths
plot.transiogram: Plot One-dimensional Transiograms
predict.multi_tpfit: Compute Theoretical Multidimensional Transiograms
predict.tpfit: Compute Theoretical One-dimensional Transiograms
print.density.lengths: Printing Empirical Densities Estimates of Stratum Lengths
print.lengths: Printing Stratum Lengths for Each Observed Category
print.multi_tpfit: Printing Model Parameters for Multidimensional Continuous Lag...
print.multi_transiogram: Printing Theoretical Multidimensional Transiograms
print.summary.lengths: Printing Stratum Lengths Summary for Each Observed Category
print.tpfit: Printing Model Parameters for One-dimensional Continuous Lag...
print.transiogram: Printing Theoretical or Empirical One-dimensional...
quench: Conditional Simulation Adjuster Via Quenching Algorithm
setCores: Set the number of CPU cores for HPC
sim: Random Field Simulation
sim_ck: Conditional Simulation Based on Indicator Cokriging
sim_ik: Conditional Simulation Based on Indicator Kriging
sim_mcs: Multinomial Categorical Simulation
sim_path: Conditional Simulation Based on Path Algorithms
spMC-package: Continuous Lag Spatial Markov Chains
summary.lengths: Summarizing Stratum Lengths
tpfit: One-dimensional Model Parameters Estimation
tpfit_ils: Iterated Least Squares Method for One-dimensional Model...
tpfit_me: Maximum Entropy Method for One-dimensional Model Parameters...
tpfit_ml: Mean Length Method for One-dimensional Model Parameters...
transiogram: Empirical Transition Probabilities Estimation for 1-D MC
which_lines: Points Classification through Directional Lines

Functions

ACM Man page
boxplot.lengths Man page Source code
contour.pemt Man page Source code
density.lengths Man page Source code
embed_MC Man page Source code
getlen Man page Source code
hist.lengths Man page Source code
image.multi_tpfit Man page Source code
image.pemt Man page Source code
is.lengths Man page Source code
is.multi_tpfit Man page Source code
is.multi_transiogram Man page Source code
is.pemt Man page Source code
is.tpfit Man page Source code
is.transiogram Man page Source code
mixplot Man page Source code
mlen Man page Source code
multi_tpfit Man page Source code
multi_tpfit_ils Man page Source code
multi_tpfit_me Man page Source code
multi_tpfit_ml Man page Source code
onAttach Source code
onLoad Source code
pemt Man page Source code
persp.multi_tpfit Man page Source code
persp.pemt Man page Source code
plot.density.lengths Man page Source code
plot.hist.lengths Man page Source code
plot.lengths Man page Source code
plot.transiogram Man page Source code
predict.multi_tpfit Man page Source code
predict.tpfit Man page Source code
print.density.lengths Man page Source code
print.lengths Man page Source code
print.multi_tpfit Man page Source code
print.multi_transiogram Man page Source code
print.summary.lengths Man page Source code
print.tpfit Man page Source code
print.transiogram Man page Source code
quench Man page Source code
setCores Man page Source code
sim Man page
sim_ck Man page
sim_ik Man page
sim_mcs Man page Source code
sim_path Man page Source code
spMC Man page
spMC-package Man page
summary.lengths Man page Source code
tpfit Man page Source code
tpfit_ils Man page Source code
tpfit_me Man page Source code
tpfit_ml Man page Source code
transiogram Man page Source code
which_lines Man page Source code

Files

COPYING
inst
inst/CITATION
tests
tests/spMC-Ex.R
src
src/Makevars
src/trans.h
src/wfun.h
src/spMC.h
src/mcs.h
src/spMC.c
NAMESPACE
NEWS
data
data/ACM.rda
R
R/print.multi_tpfit.R
R/tpfit_me.R
R/print.summary.lengths.R
R/summary.lengths.R
R/predict.multi_tpfit.R
R/is.multi_transiogram.R
R/is.transiogram.R
R/is.multi_tpfit.R
R/print.density.lengths.R
R/persp.pemt.R
R/multi_tpfit_me.R
R/plot.hist.lengths.R
R/sim_mcs.R
R/sim_ik.R
R/embed_MC.R
R/mixplot.R
R/mlen.R
R/print.lengths.R
R/which_lines.R
R/contour.pemt.R
R/setCores.R
R/boxplot.lengths.R
R/quench.R
R/plot.density.lengths.R
R/persp.multi_tpfit.R
R/is.tpfit.R
R/print.tpfit.R
R/multi_tpfit.R
R/getlen.R
R/predict.tpfit.R
R/tpfit_ml.R
R/is.lengths.R
R/hist.lengths.R
R/multi_tpfit_ml.R
R/print.multi_transiogram.R
R/multi_tpfit_ils.R
R/tpfit_ils.R
R/sim_ck.R
R/image.multi_tpfit.R
R/print.transiogram.R
R/sim.R
R/is.pemt.R
R/tpfit.R
R/density.lengths.R
R/plot.lengths.R
R/pemt.R
R/transiogram.R
R/zzz.R
R/sim_path.R
R/image.pemt.R
R/plot.transiogram.R
MD5
DESCRIPTION
man
man/print.density.lengths.Rd
man/sim_ik.Rd
man/multi_tpfit_ml.Rd
man/print.summary.lengths.Rd
man/mixplot.Rd
man/pemt.Rd
man/print.lengths.Rd
man/predict.multi_tpfit.Rd
man/multi_tpfit_ils.Rd
man/multi_tpfit_me.Rd
man/image.multi_tpfit.Rd
man/tpfit_ils.Rd
man/quench.Rd
man/persp.pemt.Rd
man/summary.lengths.Rd
man/sim_mcs.Rd
man/persp.multi_tpfit.Rd
man/is.tpfit.Rd
man/sim_ck.Rd
man/image.pemt.Rd
man/transiogram.Rd
man/is.transiogram.Rd
man/which_lines.Rd
man/plot.transiogram.Rd
man/plot.density.lengths.Rd
man/tpfit.Rd
man/is.multi_transiogram.Rd
man/hist.lengths.Rd
man/plot.lengths.Rd
man/print.tpfit.Rd
man/print.multi_transiogram.Rd
man/tpfit_me.Rd
man/print.transiogram.Rd
man/density.lengths.Rd
man/contour.pemt.Rd
man/embed_MC.Rd
man/mlen.Rd
man/boxplot.lengths.Rd
man/getlen.Rd
man/plot.hist.lengths.Rd
man/is.lengths.Rd
man/multi_tpfit.Rd
man/tpfit_ml.Rd
man/ACM.Rd
man/predict.tpfit.Rd
man/is.multi_tpfit.Rd
man/setCores.Rd
man/sim_path.Rd
man/spMC-package.Rd
man/sim.Rd
man/print.multi_tpfit.Rd
man/is.pemt.Rd
cleanup
spMC documentation built on May 20, 2017, 2:03 a.m.