time_to_event: Time to event

In spatialEco: Spatial Analysis and Modelling Utilities

Time to event

Description

Returns the time (sum to position) to a specified value

Usage

time_to_event(
  x,
  y = 1,
  dir = c("LR", "RL"),
  int = FALSE,
  up.to = FALSE,
  na.action = c("fail", "ignore")
)

Arguments

x	A vector, representing time-series, to evaluate
y	Threshold value tor return position for
dir	Direction of evaluation c("LR", "RL")
int	FALSE | TRUE - Evaluate as integer (rounds to 0 decimal places)
up.to	FALSE | TRUE - Return value before event
na.action	c("fail", "ignore"), if "fail" function will return error with NA's with "ignore" NA values will be included in count to event

Details

The time to event represents the sum of positions, in the vector, until the specified value is found ie., (0,0,1) would be 3 or, 2 with up.to=TRUE. The int argument allows for rounding a continuous variable. Since it may be difficult to find an exact match to a floating point value rounding mitigates the problem. If you want a specific rounding value (eg., 1 decimal place) you can apply it to x first then pass it to the function. The up.to argument will stop one value before the specified value of (y) regardless of integer or float. For NA handling, na.action defines the function behavior, causing it to fail or count NAs. Note that it makes no sense to actually remove NAs as it will make the run uninterpretable.

Value

A vector value representing the time to event

Author(s)

Jeffrey S. Evans <[e-mail]>

Examples

# Binomial instance
time_to_event(c(0,0,0,0,1,0,0,0,1,0))
time_to_event(c(0,0,0,0,1,0,0,0,1,0), up.to = TRUE)
time_to_event(c(0,0,0,0,1,0,0,0,1,0), dir="RL")
time_to_event(c(NA,0,0,0,1,0,0,0,1,0), na.action="ignore")

# Continuous threshold instance
( x <- runif(100, 0,7) ) 
time_to_event(x, y = 5, int=TRUE)

# raster example
library(terra)

# Binomial instance
r <- do.call(c, replicate(20,terra::rast(matrix(sample(
             c(0,1), 1000, replace=TRUE), 100, 100))))             
  ( t2e <- app(r, fun=time_to_event) )

# Continuous threshold instance
r <- do.call(c, replicate(20,terra::rast(matrix(
              runif(1000,0,7), 100, 100))))
  ( t2e <- app(r, fun=time_to_event, y=5) )

spatialEco documentation built on Nov. 18, 2023, 1:13 a.m.