spiders: Fits Predator Preferences Model
Version 1.2

Fits and simulates data from our predator preferences model, .

Browse man pages Browse package API and functions Browse package files

AuthorEdward A. Roualdes [cre, aut], Simon J. Bonner [aut]
Date of publication2016-03-02 23:35:57
MaintainerEdward A. Roualdes <eroualdes@csuchico.edu>
LicenseGPL (>= 2.0)
Version1.2
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("spiders")

Man pages

calcHypotheses: calculate hypotheses
checkHypotheses: function to check user specified hypotheses
converged: checks convergence of the parameters for the estimation...
est1: estimate hypothesis c_st = 1
estC: estimate hypothesis c_st = c
estCs: estimate hypothesis c_st = c_s
estCst: estimate hypothesis c_st
estCt: estimate hypothesis c_st = c_t
estGen: estimate a reparameterization of the hypothesis c_st
getTimeCounts: sum specified columns by time
ll: observed count log-likelihood of predator preferances model
llEM: non-observed count log-likelihood of predators preferances
predPref: parameter estimation
print.summary.predPref: predPref summary print
simPref: simulate data
spiders-package: Fits predator preferences model.
summary.predPref: predPref summary
sumSp: sum over species to get a vector of values for each time...
sumT: sum over times to get a vector of values for each species
testC: linear contrast of c_st

Functions

calcHypotheses Man page Source code
checkHypotheses Man page Source code
converged Man page Source code
est1 Man page Source code
estC Man page Source code
estCs Man page Source code
estCst Man page Source code
estCt Man page Source code
estGen Man page Source code
getTimeCounts Man page Source code
ll Man page Source code
llEM Man page Source code
predPref Man page Source code
print.summary.predPref Man page Source code
simPref Man page Source code
spiders Man page
spiders-package Man page
sumST Source code
sumSp Man page Source code
sumT Man page Source code
summary.predPref Man page Source code
testC Man page Source code

Files

inst
inst/CITATION
inst/doc
inst/doc/spiders.html
inst/doc/spiders.R
inst/doc/spiders.Rmd
tests
tests/testthat
tests/testthat/test_predPref.R
tests/test-all.R
NAMESPACE
R
R/contrasts.R
R/summary.predPref.R
R/simPref.R
R/predPref.R
R/hypotheses.R
R/estimateCst.R
R/estimate1.R
R/estimateGen.R
R/estimateC.R
R/estimateCs.R
R/util.R
R/likelihood.R
R/estimateCt.R
vignettes
vignettes/refs.bib
vignettes/spiders.Rmd
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/estC.Rd
man/simPref.Rd
man/testC.Rd
man/converged.Rd
man/llEM.Rd
man/ll.Rd
man/sumSp.Rd
man/estCt.Rd
man/spiders-package.Rd
man/calcHypotheses.Rd
man/estCst.Rd
man/estCs.Rd
man/print.summary.predPref.Rd
man/estGen.Rd
man/getTimeCounts.Rd
man/predPref.Rd
man/sumT.Rd
man/summary.predPref.Rd
man/checkHypotheses.Rd
man/est1.Rd
spiders documentation built on May 20, 2017, 1:12 a.m.