plot_s: Mapping spatially and spatio-temporally varying coefficients

View source: R/plot_s.R

plot_sR Documentation

Mapping spatially and spatio-temporally varying coefficients

Description

This function plots spatially varying coefficients (SVC) and spatio-temporally varying coefficients (STVC) with/without coefficient varying with respect to the value of the explanatory variable (NVC). Namely, the full varying coefficient equals STVC + NVC.

Usage

plot_s( mod, xnum = 0, btype = "all", xtype = "x", pmax = NULL, ncol = 8,
        col = NULL, inv =FALSE, brks = "regular", cex = 1, pch = 20,
        nmax = 20000, coords_z1_lim=NULL, coords_z2_lim = NULL)

Arguments

mod

Outpot from resf, besf, resf_vc, besf_vc, or addlearn_local function

xnum

For resf_vc, besf_vc, and addlearn_local, xnum-th SVC/STVC is plotted. If num = 0, varying intercept is plotted. For resf and besf, estimated spatially dependent residual process is plotted irrespective of the xnum value. Default is 0

btype

Effective if x_nvc =TRUE in resf_vc and besf_vc. If "all" (default), the estiamted varying coefficients (S(T)VC + NVC) are plotted as they are. If "svc", S(T)VC is plotted. If "nvc", NVC is plotted.

xtype

If "x" (default), coefficients on x is plotted. If "xconst", those on xconst is plotted

pmax

The maximum p-value for the varying coefficients to be displayed. For example, if pmax = 0.05, the only coefficients that are statistically significant at the 5 percent level are plotted. If NULL, all the coefficients are plotted. Default is NULL

ncol

Number of colors in the color palette. Default is 8

col

Color palette used for the mapping. If NULL, the blue-pink-yellow color scheme is used. Palettes in the RColorBrewer package are available. Default is NULL

inv

If TRUE, the color palett is inverted. Default is FALSE

brks

If "regular", color is changed at regular intervals. If "quantile", color is changed for each quantile

cex

Size of the dots representing sample sites

pch

A number indicating the symbol to use

nmax

If sample size exceeds nmax, nmax samples are randomly selected and plotted. Default is 20,000

coords_z1_lim

Value range for coords_z[,1] in the meigen/meigen_f function (vector). If is has two elements, the samples whose coords_z[,1] values are in between these values are plotted. If it is a scalar, samples satisfying coords_z[,1]==coords_z1_lim is plotted

coords_z2_lim

Value range for coords_z[,2] (vector).

See Also

resf, besf, resf_vc, besf_vc, addlearn_local


spmoran documentation built on Oct. 13, 2024, 1:07 a.m.

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