spocc: Interface to Species Occurrence Data Sources

A programmatic interface to many species occurrence data sources, including Global Biodiversity Information Facility ('GBIF'), 'USGSs' Biodiversity Information Serving Our Nation ('BISON'), 'iNaturalist', Berkeley 'Ecoinformatics' Engine, 'eBird', 'AntWeb', Integrated Digitized 'Biocollections' ('iDigBio'), 'VertNet', Ocean 'Biogeographic' Information System ('OBIS'), and Atlas of Living Australia ('ALA'). Includes functionality for retrieving species occurrence data, and combining those data.

Install the latest version of this package by entering the following in R:
install.packages("spocc")
AuthorScott Chamberlain [aut, cre], Karthik Ram [ctb], Ted Hart [ctb]
Date of publication2016-12-07 08:43:54
MaintainerScott Chamberlain <myrmecocystus@gmail.com>
LicenseMIT + file LICENSE
Version0.6.0
https://github.com/ropensci/spocc

View on CRAN

Functions

as.ala Man page
as.antweb Man page
as.bison Man page
as.ecoengine Man page
as.gbif Man page
as.idigbio Man page
as.inat Man page
as.obis Man page
as.vertnet Man page
bbox2wkt Man page
fixnames Man page
inspect Man page
inspect.data.frame Man page
inspect.occdat Man page
inspect.occkey Man page
occ Man page
occ2df Man page
occ_coverage Man page
occ_names Man page
occ_names_options Man page
occ_options Man page
print.occdat Man page
print.occdatind Man page
print.occnames Man page
spocc Man page
spocc_capwords Man page
spocc_duplicates Man page
spocc_objects Man page
spocc-package Man page
summary.occdat Man page
summary.occdatind Man page
wkt Man page
wkt2bbox Man page
wkt_read Man page
wkt_vis Man page
wkt_write Man page

Files

inst
inst/doc
inst/doc/spocc_vignette.html
inst/doc/spocc_vignette.Rmd
inst/js
inst/js/README-terraformer.md
inst/js/terraformer-wkt-parser.js
inst/js/LICENSE-terraformer
inst/js/turf-centroid.js
inst/js/LICENSE-turf-centroid.R
tests
tests/testthat.R
tests/testthat
tests/testthat/test-occ2df.R tests/testthat/test-paging.R tests/testthat/test-options.R tests/testthat/test-taxize-integration.R tests/testthat/test-has_coords.R tests/testthat/test-idbasedsearch.R tests/testthat/test-geometry.R tests/testthat/test-occ.R tests/testthat/test-common_params.R tests/testthat/test-wkt_vis.R
NAMESPACE
NEWS.md
R
R/read_wkt.R R/ala_helpers.R R/inspect.R R/fixnames.r R/on_load.R R/spocc_duplicates.R R/occ_names.R R/spocc-package.R R/as.ecoengine.R R/occ_options.r R/as.ala.R R/wkt_bbox.R R/as.gbif.R R/occ_names_options.R R/as.antweb.R R/occ2df.R R/ecoengine_helpers.R R/plugin_helpers.R R/as.obis.R R/obis_helpers.R R/occ_coverage.R R/zzz.r R/occ.r R/as.vertnet.R R/as.bison.R R/wkt_vis.r R/rename.R R/as.idigbio.R R/inat.R R/methods.r R/plugins.r R/handle_sp.R R/as.inat.R R/antweb_helpers.R R/rbindfill.R
vignettes
vignettes/img
vignettes/img/ggplot2.png
vignettes/img/shiny.png
vignettes/img/leaflet.png
vignettes/img/baseplots.png
vignettes/img/gist.png
vignettes/spocc_vignette.Rmd
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/occ_coverage.Rd man/bbox2wkt.Rd man/spocc_duplicates.Rd man/occ.Rd man/spocc-package.Rd man/fixnames.Rd man/as.gbif.Rd man/as.idigbio.Rd man/as.bison.Rd man/occ2df.Rd man/as.ala.Rd man/as.obis.Rd man/occ_names_options.Rd man/spocc_capwords.Rd man/as.antweb.Rd man/wkt_vis.Rd man/as.vertnet.Rd man/as.inat.Rd man/as.ecoengine.Rd man/wkt.Rd man/spocc_objects.Rd man/occ_options.Rd man/inspect.Rd man/occ_names.Rd
LICENSE

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.