chlamydiae: Chlamydiae Sub-Taxa of Global Patterns Data

Description Usage Format References Examples


A phyloseq class object containing data on 16s rRNA diversity within the Chlamydiae bacteria taxon, originally appearing in PNAS.




The format is: phyloseq-class experiment-level object.


McMurdie P.J., Holmes S. (2013). phyloseq: A Bioconductor Package for Handling and Analysis of High-Throughput Phylogenetic Sequence Data. PLoS ONE 8(4): e61217.

Caporaso, J. G., et al. (2011). Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample. PNAS, 108, 4516-4522. PMCID: PMC3063599

This can be viewed/downloaded at:

Sankaran, K and Holmes, S. structSSI: Simultaneous and Selective Inference for Grouped or Hierarchically Structured Data. Journal of Statistical Software, 59(13), 1-21. 2014.



structSSI documentation built on May 30, 2017, 2:52 a.m.

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