subtype: Cluster analysis to find molecular subtypes and their assessment

subtype performs a biclustering procedure on a input dataset and assess whether resulting clusters are promising subtypes. Note that the R-package rsmooth should be installed before implementing subtype. rsmooth can be downloaded from http://www.meb.ki.se/~yudpaw.

Author
Andrey Alexeyenko, Woojoo Lee and Yudi Pawitan
Date of publication
2013-01-14 13:53:58
Maintainer
Woojoo Lee <lwj221@gmail.com>
License
GPL-2
Version
1.0

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Man pages

subtype
Cluster analysis to find molecular subtypes and their...
summary
Summarizing the output from subtype

Files in this package

subtype
subtype/MD5
subtype/R
subtype/R/ufun.R
subtype/R/tstatistics2.R
subtype/R/test_subtype_only.R
subtype/R/summary.R
subtype/R/subtype.R
subtype/R/pval2FDR.R
subtype/R/low_p_value_integral.R
subtype/R/ELF.R
subtype/NAMESPACE
subtype/man
subtype/man/summary.Rd
subtype/man/subtype.Rd
subtype/DESCRIPTION