supclust: Supervised Clustering of Predictor Variables such as Genes

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Methodology for supervised grouping aka "clustering" of potentially many predictor variables, such as genes etc.

Author
Marcel Dettling <marcel.dettling@zhaw.ch> and Martin Maechler
Date of publication
2011-12-02 16:23:18
Maintainer
Martin Maechler <maechler@stat.math.ethz.ch>
License
GPL-2
Version
1.0-7
URLs

View on CRAN

Man pages

back.search
Internal functions for Supervised Grouping
coef.pelora
Extract the Model Coefficients of Pelora
dlda
Classification with Wilma's Clusters
fitted.pelora
Extract the Fitted Values of Pelora
fitted.wilma
Extract the Fitted Values of Wilma
leukemia
A part of the Golub's famous AML/ALL-leukemia dataset
margin
Classification Margin Between Two Sample Classes
pelora
Supervised Grouping of Predictor Variables
plot.pelora
2-Dimensional Visualization of Pelora's Output
plot.wilma
2-Dimensional Visualization of Wilma's Output
predict.pelora
Predict Method for Pelora
predict.wilma
Predict Method for Wilma
print.pelora
Print Method for Pelora Objects
print.wilma
Print Method for Wilma Objects
score
Wilcoxon Score for Binary Problems
sign.change
Sign-flipping of Predictor Variables to Obtain Equal Polarity
signflip
Sign-flipping of Predictor Variables to Obtain Equal Polarity
standardize.genes
Standardization of Predictor Variables
summary.pelora
Summary Method for Pelora Objects
summary.wilma
Summary Method for Wilma Objects
wilma
Supervised Clustering of Predictor Variables

Files in this package

supclust
supclust/MD5
supclust/data
supclust/data/leukemia.rda
supclust/tests
supclust/tests/pelora-ex.Rout.save
supclust/tests/wilma-ex.Rout.save-64b
supclust/tests/pelora-ex.R
supclust/tests/wilma-ex.Rout.save-32b
supclust/tests/wilma-ex.Rout.save
supclust/tests/wilma-ex.R
supclust/DESCRIPTION
supclust/NAMESPACE
supclust/TODO
supclust/man
supclust/man/summary.wilma.Rd
supclust/man/print.pelora.Rd
supclust/man/wilma.Rd
supclust/man/signflip.Rd
supclust/man/score.Rd
supclust/man/summary.pelora.Rd
supclust/man/predict.pelora.Rd
supclust/man/sign.change.Rd
supclust/man/fitted.pelora.Rd
supclust/man/print.wilma.Rd
supclust/man/standardize.genes.Rd
supclust/man/dlda.Rd
supclust/man/fitted.wilma.Rd
supclust/man/pelora.Rd
supclust/man/margin.Rd
supclust/man/plot.pelora.Rd
supclust/man/coef.pelora.Rd
supclust/man/predict.wilma.Rd
supclust/man/leukemia.Rd
supclust/man/back.search.Rd
supclust/man/plot.wilma.Rd
supclust/R
supclust/R/pelora.R
supclust/R/zzz.R
supclust/R/pelora-utils.R
supclust/R/wilma.R
supclust/R/wilma-utils.R
supclust/ChangeLog
supclust/INDEX
supclust/src
supclust/src/Makevars
supclust/src/wilma.c
supclust/src/pelora.c