survCliques-class: Class '"survCliques"'

In survClip: Survival Analysis for Pathways

Description

Class for survival clique analysis

Objects from the Class

Objects can be created by calls of the form new("survCliques", ...). alphas, zlist, cliques, cliquesLoadings.

Slots

.Data:

Object of class "list"

alphas:

Object of class "numeric". It contains pvalues of the cliques.

zlist:

Object of class "list". For each cliques, the list of pvalues for all the covariates.

cliques:

Object of class "list". The list of the genes in the cliques.

coxObjs:

Object of class "list". For each cliques, the object used for Coxph analysis.

cliquesLoadings:

Object of class "list". For each cliques, the loadings as calculated by the PCA.

cliquesExpr:

Object of class "list". For each cliques, the cliques expression.

Extends

Class "list", from data part. Class "vector", by class "list", distance 2. Class "Ulist", by class "list", distance 2. Class "Uvector", by class "list", distance 3.

Methods

No methods defined with class "survCliques" in the signature.

Author(s)

Paolo Martini

Examples

showClass("survCliques")

survClip documentation built on Nov. 22, 2017, 5:04 p.m.