survPath-class: Class '"survPath"'

In survClip: Survival Analysis for Pathways

Description

Class for survival pathway analysis.

Objects from the Class

Objects can be created by calls of the form new("survPath", ...). pvalue, zlist, coxObj, loadings and the method used.

Slots

.Data:

Object of class "list"

pvalue:

Object of class "numeric". It contains the pvalue of the whole model generated by the analysis.

zlist:

Object of class "numeric". List of pvalues for all the covariates.

coxObj:

Object of class "data.frame". The object used for Coxph analysis.

loadings:

Object of class "matrix". The loadings as calculated by the PCA.

method:

Object of class "character". Type of method used.

Extends

Class "list", from data part. Class "vector", by class "list", distance 2. Class "Ulist", by class "list", distance 2. Class "Uvector", by class "list", distance 3.

Methods

No methods defined with class "survPath" in the signature.

Author(s)

Paolo Martini

Examples

showClass("survPath")

survClip documentation built on Nov. 22, 2017, 5:04 p.m.