surv_reporting_probability: Compute cumulative reporting probability
In survinger: Design-Adjusted Inference for Pathogen Lineage Surveillance

surv_reporting_probability

R Documentation

Compute cumulative reporting probability

Description

Compute cumulative reporting probability

Usage

surv_reporting_probability(delay_fit, delta, stratum = NULL)

Arguments

`delay_fit`	A `surv_delay_fit` object.
`delta`	Integer vector. Days since collection.
`stratum`	Character or `NULL`. Default `NULL`.

Value

Numeric vector of probabilities.

Examples

sim <- surv_simulate(n_regions = 3, n_weeks = 12, seed = 1)
d <- surv_design(sim$sequences, ~ region,
                 sim$population[c("region", "seq_rate")], sim$population)
fit <- surv_estimate_delay(d)
surv_reporting_probability(fit, delta = c(7, 14, 21))

survinger documentation built on April 27, 2026, 9:10 a.m.