survminer: Drawing Survival Curves using 'ggplot2'
Version 0.3.1

Contains the function 'ggsurvplot()' for drawing easily beautiful and 'ready-to-publish' survival curves with the 'number at risk' table and 'censoring count plot'. Other functions are also available to plot adjusted curves for `Cox` model and to visually examine 'Cox' model assumptions.

Browse man pages Browse package API and functions Browse package files

AuthorAlboukadel Kassambara [aut, cre], Marcin Kosinski [aut], Przemyslaw Biecek [ctb]
Date of publication2017-03-21 17:33:15 UTC
MaintainerAlboukadel Kassambara <alboukadel.kassambara@gmail.com>
LicenseGPL-2
Version0.3.1
URL http://www.sthda.com/english/rpkgs/survminer/
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("survminer")

Man pages

add_ggsurvplot: Add Components to a ggsurvplot
arrange_ggsurvplots: Arranging Multiple ggsurvplots
BMT: Bone Marrow Transplant
BRCAOV.survInfo: Breast and Ovarian Cancers Survival Information
ggcompetingrisks: Cumulative Incidence Curves for Competing Risks
ggcoxadjustedcurves: Adjusted Survival Curves for Cox Proportional Hazards Model
ggcoxdiagnostics: Diagnostic Plots for Cox Proportional Hazards Model with...
ggcoxfunctional: Functional Form of Continuous Variable in Cox Proportional...
ggcoxzph: Graphical Test of Proportional Hazards with ggplot2
ggcumcensor: Cumulative Number of Censored Subjects
ggcumevents: Cumulative Number of Events Table
ggforest: Drawing Forest Plot for CoxPH model
ggrisktable: Number at Risk Table
ggsurvevents: Distribution of Event's Times
ggsurvplot: Drawing Survival Curves Using ggplot2
ggsurvtheme: Theme for Survminer Plots
myeloma: Multiple Myeloma Data
pairwise_survdiff: Multiple Comparisons of Survival Curves
surv_cutpoint: Determine the Optimal Cutpoint for Continuous Variables
surv_summary: Nice Summary of a Survival Curve
theme_classic2: ggplot2 classic theme with axis lines

Functions

+.ggsurv Man page
BMT Man page
BRCAOV.survInfo Man page
\%+\% Man page
add_ggsurvplot Man page
add_surv_median Source code
apply_surv_func Source code
arrange_ggsurvplots Man page Source code
build_ggsurvplot Source code
check_legend_labs Source code
check_ylab Source code
clean_strata Source code
compact Source code
connect2origin Source code
count_ggplots Source code
dichotomize Source code
flat Source code
geom_confint Source code
get_data Source code
get_default_breaks Source code
get_legend Source code
get_lty Source code
get_not_numeric_vars Source code
get_pvalue Source code
get_timepoints_survsummary Source code
get_variable_value Source code
get_variables Source code
ggcompetingrisks Man page Source code
ggcompetingrisks.cuminc Source code
ggcompetingrisks.survfitms Source code
ggcoxadjustedcurves Man page Source code
ggcoxdiagnostics Man page Source code
ggcoxfunctional Man page Source code
ggcoxzph Man page Source code
ggcumcensor Man page Source code
ggcumevents Man page Source code
ggforest Man page Source code
ggpar Source code
ggrisktable Man page Source code
ggsurvevents Man page Source code
ggsurvplot Man page Source code
hide_legend Source code
myeloma Man page
pairwise_survdiff Man page Source code
parse_risk_table_arg Source code
plot.surv_cutpoint Man page Source code
print.ggcoxfunctional Man page Source code
print.ggcoxzph Man page Source code
print.ggsurvplot Man page Source code
print.plot_surv_cutpoint Man page Source code
print.surv_cutpoint Man page Source code
put_risktable_in_survplot Source code
set_general_gpar Source code
set_large_dash_as_ytext Source code
set_ncensorplot_gpar Source code
set_risktable_gpar Source code
summary.surv_cutpoint Man page Source code
surv_categorize Man page Source code
surv_cutpoint Man page Source code
surv_summary Man page Source code
theme_classic2 Man page Source code
theme_cleantable Man page Source code
theme_survminer Man page Source code
trim Source code

Files

inst
inst/doc
inst/doc/Specifiying_weights_in_log-rank_comparisons.R
inst/doc/Playing_with_fonts_and_texts.R
inst/doc/Playing_with_fonts_and_texts.html
inst/doc/Specifiying_weights_in_log-rank_comparisons.Rmd
inst/doc/Informative_Survival_Plots.html
inst/doc/Specifiying_weights_in_log-rank_comparisons.html
inst/doc/Informative_Survival_Plots.R
inst/doc/Playing_with_fonts_and_texts.Rmd
inst/doc/Informative_Survival_Plots.Rmd
NAMESPACE
NEWS.md
data
data/BMT.rda
data/BRCAOV.survInfo.rda
data/myeloma.rda
R
R/ggcoxzph.R
R/myeloma.R
R/ggcoxadjustedcurves.R
R/theme_classic2.R
R/ggrisktable.R
R/ggforest.R
R/ggsurvevents.R
R/pairwise_survdiff.R
R/arrange_ggsurvplots.R
R/BRCAOV.survInfo.R
R/utilities.R
R/surv_cutpoint.R
R/ggcumevents.R
R/ggcompetingrisks.R
R/ggsurvtheme.R
R/surv_summary.R
R/ggcoxdiagnostics.R
R/ggcoxfunctional.R
R/add_ggsurvplot.R
R/ggcumcensor.R
R/BMT.R
R/ggsurvplot.R
vignettes
vignettes/Specifiying_weights_in_log-rank_comparisons.Rmd
vignettes/ggsci.css
vignettes/README.md
vignettes/Playing_with_fonts_and_texts.Rmd
vignettes/survminer_orly.png
vignettes/Informative_Survival_Plots.Rmd
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/ggcoxdiagnostics.Rd
man/myeloma.Rd
man/pairwise_survdiff.Rd
man/add_ggsurvplot.Rd
man/BRCAOV.survInfo.Rd
man/ggcoxfunctional.Rd
man/ggcumevents.Rd
man/ggcoxzph.Rd
man/BMT.Rd
man/surv_summary.Rd
man/ggsurvtheme.Rd
man/arrange_ggsurvplots.Rd
man/ggsurvevents.Rd
man/theme_classic2.Rd
man/ggforest.Rd
man/ggsurvplot.Rd
man/surv_cutpoint.Rd
man/ggcoxadjustedcurves.Rd
man/ggcumcensor.Rd
man/ggcompetingrisks.Rd
man/ggrisktable.Rd
tools
tools/README-ggplot2-customized-survival-plot-1.png
tools/README-ggplot2-uber-customized-survival-plot-1.png
tools/README-ggplot2-uber-platinium-customized-survival-plot-1.png
tools/README-ggplot2-more-customized-survival-plot-1.png
tools/README-ggplot2-basic-survival-plot-1.png
tools/README-ggplot2-uber-platinium-premium-customized-survival-plot-1.png
survminer documentation built on May 20, 2017, 1:02 a.m.