plot_regions-methods: Methods for Function 'plot_regions'

In swash: Swash-Backwash Model for the Single Epidemic Wave

Methods for Function plot_regions

Description

Methods for function plot_regions

Methods

signature( object = "sbm", col = "red", lty = "solid", scale = FALSE, normalize_by_col = NULL, normalize_factor = 1, plot_rollmean = FALSE, rollmean_col = "blue", rollmean_lty = "solid", rollmean_k = 7, rollmean_align = "center", rollmean_fill = NA, plot_growth = FALSE, growth_rollmean = FALSE, growth_col = "orange", growth_lty = "solid", growth_per_time_unit = 1)

Plots regional infection curves in N plots for N regions, with the number of columns equals 4 and the number of rows is calculated based the size of N. Set the color by the argument col. If scale is TRUE, the y axis of the plots is set uniformly based on the maximum value across all regions. If the input data contains a column to normalize the infection numbers (such as regional population), the user may use this data to normalize the infection numbers by setting normalize_by_col. If this density value should be multiplied by a factor (e.g. regional infections per 100,000 inhabitants), this can be set with the argument normalize_by_col (default: 1).

Author(s)

Thomas Wieland

swash documentation built on Feb. 15, 2026, 5:07 p.m.