swimmer_lines: Adding lines to a swimmers plot

In swimplot: Tools for Creating Swimmers Plots using 'ggplot2'

Description

This function allows you to add lines to a swimmers plot created with swimmer_plot

Usage

swimmer_lines(
  df_lines,
  id = "id",
  start = "start",
  end = "end",
  adj.y = 0,
  name_linetype = NULL,
  name_col = NULL,
  name_size = NULL,
  name_alpha = NULL,
  ...
)

Arguments

df_lines	a data frame
id	column name for id, default is 'id'
start	column name with the line start locations
end	column name with the line end locations
adj.y	amount to adjust the line within the box vertically (default is 0, line is in the centre of each bar)
name_linetype	a column name to map the line type
name_col	a column name to map the line colour
name_size	a column name to map the line size
name_alpha	a column name to map the line transparency
...	additional geom_segment() arguments

Value

a swimmer plot with lines

See Also

swimmer_plot swimmer_points swimmer_lines swimmer_points_from_lines swimmer_arrows swimmer_text

Examples

#Start with a base swimmer plot
swim_plot <-
swimmer_plot(df=ClinicalTrial.Arm,id='id',end='End_trt',name_fill='Arm',col="black",id_order='Arm')


# Then add lines to the plot

swim_plot_with_lines <- swim_plot +
swimmer_lines(df_lines=ClinicalTrial.Response,id='id',start =
'Response_start',end='Response_end',name_col='Response',size=3)


# Add ggplot layers to improve the plot's aesthetic

swim_plot_with_lines +
ggplot2::scale_color_manual(name="Response",values=c("grey20","grey80"))+
ggplot2::scale_fill_manual(name="Treatment",values=c("#e41a1c", "#377eb8","#4daf4a"))+
ggplot2::ylab('Time (Days)')

swimplot documentation built on March 31, 2021, 1:06 a.m.