Man pages for taxadb
A High-Performance Taxonomic Database Interface
| available_providers | Name providers available for a given version |
| available_versions | Versions of the taxadb data available |
| build_col | Rebuild the Catalogue of Life snapshot |
| build_dir | Where build inputs and outputs are kept |
| build_fishbase | Rebuild the FishBase or SeaLifeBase snapshot |
| build_gbif | Rebuild the GBIF backbone snapshot |
| build_itis | Rebuild the ITIS snapshot |
| build_ncbi | Rebuild the NCBI Taxonomy snapshot |
| build_ott | Rebuild the Open Tree Taxonomy snapshot |
| clean_names | Clean taxonomic names |
| common_contains | common name starts with |
| common_starts_with | common name starts with |
| filter_by | Creates a data frame with column name given by 'by', and... |
| filter_common | Look up taxonomic information by common name |
| filter_id | Return a taxonomic table matching the requested ids |
| filter_name | Look up taxonomic information by scientific name |
| filter_rank | Get all members (descendants) of a given rank level |
| fuzzy_filter | Match names that start or contain a specified text string |
| get_ids | get_ids |
| get_names | get_names |
| latest_version | The most recent taxadb snapshot version |
| list_snapshots | List the taxonomic snapshots available from the taxadb... |
| name_contains | return all taxa in which scientific name contains the text... |
| name_starts_with | scientific name starts with |
| taxadb_dir | Show the local taxadb directory |
| taxadb_provider_info | Describe the taxonomic name providers |
| taxadb_providers | Providers taxadb can rebuild |
| taxadb_repo | The taxadb data repository |
| taxadb_uri | Locate the Parquet files backing a taxadb table |
| taxa_tbl | Return a reference to a given table in the taxadb database |
| td_build | Rebuild taxadb snapshots from the providers |
| td_connect | Connect to the taxadb database |
| td_create | Create a local taxadb database |
| td_disconnect | Disconnect from the taxadb database. |
| td_download | Install a local copy of a taxadb snapshot |
| td_manifest | Describe a built snapshot |
| td_validate | Check a taxadb table against the taxadb Darwin Core rules |
| td_write_metadata | Write the metadata published with a snapshot |
