taxize: Taxonomic Information from Around the Web

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Interacts with a suite of web 'APIs' for taxonomic tasks, such as verifying species names, and getting taxonomic 'hierarchies'.

Author
Scott Chamberlain [aut, cre], Eduard Szoecs [aut], Zachary Foster [aut], Carl Boettiger [aut], Karthik Ram [aut], Ignasi Bartomeus [aut], John Baumgartner [aut], James O'Donnell [aut]
Date of publication
2016-07-24 00:03:34
Maintainer
Scott Chamberlain <myrmecocystus@gmail.com>
License
MIT + file LICENSE
Version
0.7.9
URLs

View on CRAN

Man pages

apg
Get APG names
apg_families
MOBOT family names
apg_lookup
Lookup in the APGIII taxonomy and replace family names
apg_orders
MOBOT order names
bold_search
Search Barcode of Life for taxonomic IDs
children
Retrieve immediate children taxa for a given taxon name or...
class2tree
Convert list of classifications to a tree.
classification
Retrieve the taxonomic hierarchy for a given taxon ID.
col_children
Search Catalogue of Life for for direct children of a...
col_classification-defunct
Search Catalogue of Life for taxonomic classifications.
col_downstream
Use Catalogue of Life to get downstream taxa to a given...
col_search
Search Catalogue of Life for taxonomic IDs
comm2sci
Get scientific names from common names.
downstream
Retrieve the downstream taxa for a given taxon name or ID.
eol_dataobjects
Given the identifier for a data object, return all metadata...
eol_hierarchy-defunct
Retrieve the taxonomic hierarchy from given EOL taxonID.
eol_invasive-defunct
Search for presence of taxonomic names in EOL invasive...
eol_pages
Search for pages in EOL database using a taxonconceptID.
eol_search
Search for terms in EOL database.
eubon
EU BON taxonomy
fungorum
Index Fungorum
gbif_downstream
Retrieve all taxa names downstream in hierarchy for GBIF
gbif_name_usage
Lookup details for specific names in all taxonomies in GBIF.
gbif_parse
Parse taxon names using the GBIF name parser.
genbank2uid
Get NCBI taxonomy UID from GenBankID
getacceptednamesfromtsn
Get accepted names from tsn
getanymatchcount
Get any match count.
get_boldid
Get the BOLD (Barcode of Life) code for a search term.
get_colid
Get the Catalogue of Life ID from taxonomic names.
getcommentdetailfromtsn
Get comment detail from TSN
getcommonnamesfromtsn
Get common names from tsn
getcoremetadatafromtsn
Get core metadata from tsn
getcoveragefromtsn
Get coverge from tsn
getcredibilityratingfromtsn
Get credibility rating from tsn
getcredibilityratings
Get possible credibility ratings
getcurrencyfromtsn
Get currency from tsn
getdatedatafromtsn
Get date data from tsn
getdescription
Get description of the ITIS service
get_eolid
Get the EOL ID from Encyclopedia of Life from taxonomic...
getexpertsfromtsn
Get expert information for the TSN.
getfullhierarchyfromtsn
Get full hierarchy from tsn
getfullrecordfromlsid
Returns the full ITIS record for the TSN in the LSID, found...
getfullrecordfromtsn
Get full record from TSN.
get_gbifid
Get the GBIF backbone taxon ID from taxonomic names.
get_genes_avail-defunct
Retrieve gene sequences from NCBI by accession number.
get_genes-defunct
Retrieve gene sequences from NCBI by accession number.
getgeographicdivisionsfromtsn
Get geographic divisions from tsn
getgeographicvalues
Get all possible geographic values
getglobalspeciescompletenessfromtsn
Get global species completeness from tsn
gethierarchydownfromtsn
Get hierarchy down from tsn
gethierarchyupfromtsn
Get hierarchy up from tsn
get_ids
Retrieve taxonomic identifiers for a given taxon name.
getitisterms
Get itis terms from common names
getitistermsfromcommonname
Get itis terms from common names
getitistermsfromscientificname
Get itis terms from scientific names
getjurisdictionaloriginfromtsn
Get jurisdictional origin from tsn
getjurisdictionoriginvalues
Get jurisdiction origin values
getjurisdictionvalues
Get possible jurisdiction values
getkey
Function to get API key.
getkingdomnamefromtsn
Get kingdom names from tsn
getkingdomnames
Get all possible kingdom names
getlastchangedate
Provides the date the ITIS database was last updated.
getlsidfromtsn
Gets the unique LSID for the TSN, or an empty result if there...
get_nbnid
Get the UK National Biodiversity Network ID from taxonomic...
getothersourcesfromtsn
Returns a list of the other sources used for the TSN.
getparenttsnfromtsn
Returns the parent TSN for the entered TSN.
getpublicationsfromtsn
Returns a list of the pulications used for the TSN.
getranknames
Provides a list of all the unique rank names contained in the...
getrecordfromlsid
Gets the partial ITIS record for the TSN in the LSID, found...
getreviewyearfromtsn
Returns the review year for the TSN.
getscientificnamefromtsn
Returns the scientific name for the TSN. Also returns the...
get_seqs-defunct
Retrieve gene sequences from NCBI by accession number.
getsynonymnamesfromtsn
Returns a list of the synonyms (if any) for the TSN.
gettaxonauthorshipfromtsn
Returns the author information for the TSN.
gettaxonomicranknamefromtsn
Returns the kingdom and rank information for the TSN.
gettaxonomicusagefromtsn
Returns the usage information for the TSN.
get_tpsid
Get the NameID codes from Tropicos for taxonomic names.
get_tsn
Get the TSN code for a search term.
gettsnbyvernacularlanguage
Get tsn by vernacular language
gettsnfromlsid
Gets the TSN corresponding to the LSID, or an empty result if...
get_ubioid-defunct
Get the uBio id for a search term
get_uid
Get the UID codes from NCBI for taxonomic names.
getunacceptabilityreasonfromtsn
Returns the unacceptability reason, if any, for the TSN.
getvernacularlanguages
Provides a list of the unique languages used in the...
gisd_invasive-defunct
Check invasive species status for a set of species from GISD...
gni_details
Search for taxonomic name details using the Global Names...
gni_parse
Parse scientific names using EOL's name parser.
gni_search
Search for taxonomic names using the Global Names Index.
gnr_datasources
Get data sources for the Global Names Resolver.
gnr_resolve
Resolve names using Global Names Resolver.
ion
ION - Index to Organism Names
iplant_resolve
iPlant name resolution
ipni_search
Search for names in the International Plant Names Index...
itis_acceptname
Retrieve accepted TSN and name
itis-api
Low level functions for working with the ITIS API.
itis_downstream
Retrieve all taxa names or TSNs downstream in hierarchy from...
itis_getrecord
Get full ITIS record for one or more ITIS TSN's or lsid's.
itis_hierarchy
ITIS hierarchy
itis_kingdomnames
Get kingdom names
itis_lsid
Get kingdom names
itis_name-deprecated
Get taxonomic names for a given taxonomic name query.
itis_native
Get jurisdiction data, i.e., native or not native in a...
itis_refs
Get references related to a ITIS TSN.
itis_searchcommon
Searches common name and acts as thin wrapper around...
itis_taxrank
Retrieve taxonomic rank name from given TSN.
itis_terms
Get ITIS terms, i.e., tsn's, authors, common names, and...
iucn_getname
Get any matching IUCN species names
iucn_id
Get an ID for a IUCN listed taxon
iucn_status
Extractor functions for 'iucn'-class.
iucn_summary
Get a summary from the IUCN Red List
lowest_common
Retrieve the lowest common taxon and rank for a given taxon...
names_list
Get a random vector of species names.
nbn_classification
Search UK National Biodiversity Network database for...
nbn_search
Search UK National Biodiversity Network database
nbn_synonyms
Return all synonyms for a taxon name with a given id from NBN
ncbi_children
Search NCBI for children of a taxon
ncbi_getbyid-defunct
Retrieve gene sequences from NCBI by accession number.
ncbi_getbyname-defunct
Retrieve gene sequences from NCBI by taxon name and gene...
ncbi_get_taxon_summary
NCBI taxon information from uids
ncbi_search-defunct
Search for gene sequences available for taxa from NCBI.
phylomatic_format-defunct
Get family names to make Phylomatic input object, and output...
phylomatic_tree-defunct
Query Phylomatic for a phylogenetic tree.
ping
Ping an API used in taxize to see if it's working.
plantGenusNames
Vector of plant genus names from ThePlantList
plantminer
Search for taxonomy data from Plantminer.com
plantNames
Vector of plant species (genus - specific epithet) names from...
rankagg
Aggregate data by given taxonomic rank
rank_ref
Lookup-table for IDs of taxonomic ranks
resolve
Resolve names from different data sources
sci2comm
Get common names from scientific names.
scrapenames
Resolve names using Global Names Recognition and Discovery.
searchbycommonname
Search for tsn by common name
searchbycommonnamebeginswith
Search for tsn by common name beginning with
searchbycommonnameendswith
Search for tsn by common name ending with
searchbyscientificname
Search by scientific name
searchforanymatch
Search for any match
searchforanymatchpaged
Search for any matched page
status_codes
Get HTTP status codes
synonyms
Retrieve synonyms from various sources given input taxonomic...
tax_agg
Aggregate species data to given taxonomic rank
taxize_capwords
Capitalize the first letter of a character string.
taxize_cite
Get citations and licenses for data sources used in taxize
taxize-defunct
Defunct functions in taxize
taxize_ldfast
Replacement function for ldply that should be faster in all...
taxize-package
Taxonomic Information from Around the Web
tax_name
Get taxonomic names for a given rank
tax_rank
Get rank for a given taxonomic name.
theplantlist
Lookup-table for family, genus, and species names for...
tnrs
Phylotastic Taxonomic Name Resolution Service.
tnrs_sources
TNRS sources
tol_resolve
Resolve names using Open Tree of Life resolver
tp_acceptednames-deprecated
Return all accepted names for a taxon name with a given id.
tp_accnames
Return all accepted names for a taxon name with a given id.
tp_classification-defunct
Return all synonyms for a taxon name with a given id.
tp_dist
Return all distribution records for for a taxon name with a...
tpl_families
Get The Plant List families.
tpl_get
Get The Plant List csv files.
tpl_search-defunct
A light wrapper around the taxonstand fxn to call...
tp_namedistributions-deprecated
Return all distribution records for for a taxon name with a...
tp_namereferences-deprecated
Return all reference records for for a taxon name with a...
tp_refs
Return all reference records for for a taxon name with a...
tp_search
Search Tropicos by scientific name, common name, or Tropicos...
tp_summary
Return summary data a taxon name with a given id.
tp_synonyms
Return all synonyms for a taxon name with a given id.
ubio_classification-defunct
uBio classification
ubio_classification_search-defunct
This function will return ClassificationBankIDs...
ubio_id-defunct
Search uBio by namebank ID.
ubio_ping-defunct
uBio ping
ubio_search-defunct
This function will return NameBankIDs that match given search...
ubio_synonyms-defunct
Search uBio for taxonomic synonyms by hierarchiesID.
upstream
Retrieve the upstream taxa for a given taxon name or ID.
vascan_search
Search the CANADENSYS Vascan API.

Files in this package

taxize
taxize/inst
taxize/inst/examples
taxize/inst/examples/species.txt
taxize/inst/CITATION
taxize/inst/ignore
taxize/inst/ignore/rbladj.r
taxize/inst/ignore/taxonclass2.R
taxize/inst/ignore/tests
taxize/inst/ignore/tests/test-ubio_id.R
taxize/inst/ignore/tests/test-ubio_namebank.R
taxize/inst/ignore/tests/test-ubio_synonyms.R
taxize/inst/ignore/tests/test-ubio_classification.R
taxize/inst/ignore/tests/test-ubio_search.R
taxize/inst/ignore/phylomatic_tree2.R
taxize/inst/ignore/taxonclass.R
taxize/inst/ignore/nature_serve.R
taxize/inst/ignore/try_with_timeout.R
taxize/inst/ignore/aou_notes.R
taxize/inst/ignore/taxonid.R
taxize/inst/ignore/phytools_fxns_touse.r
taxize/inst/doc
taxize/inst/doc/taxize_vignette.html
taxize/inst/doc/taxize_vignette.Rmd
taxize/inst/doc/name_cleaning.Rmd
taxize/inst/doc/taxize_infotable.Rmd
taxize/inst/doc/name_cleaning.html
taxize/inst/doc/taxize_infotable.html
taxize/inst/vign
taxize/inst/vign/cache
taxize/inst/vign/cache/taxname_0f3fcc7119f159af267de7a029f64f5e.RData
taxize/inst/vign/cache/tnrs_c39c1e0c556437f6b37ba3c369e8be54.rdb
taxize/inst/vign/cache/tnrs_c39c1e0c556437f6b37ba3c369e8be54.RData
taxize/inst/vign/cache/tnrs_c39c1e0c556437f6b37ba3c369e8be54.rdx
taxize/inst/vign/cache/__packages
taxize/inst/vign/cache/taxname_0f3fcc7119f159af267de7a029f64f5e.rdx
taxize/inst/vign/cache/taxname_0f3fcc7119f159af267de7a029f64f5e.rdb
taxize/inst/vign/taxize_infotable.md
taxize/inst/vign/taxize_vignette.md
taxize/inst/vign/taxize_vignette.Rmd
taxize/inst/vign/name_cleaning.Rmd
taxize/inst/vign/name_cleaning.md
taxize/inst/vign/taxize_infotable.Rmd
taxize/tests
taxize/tests/testthat
taxize/tests/testthat/test-col_children.R
taxize/tests/testthat/test-iucn_summary.R
taxize/tests/testthat/Rplots.pdf
taxize/tests/testthat/test-gbif_downstream.R
taxize/tests/testthat/test-tp_synonyms.R
taxize/tests/testthat/test-tp_summary.R
taxize/tests/testthat/test-gni_parse.R
taxize/tests/testthat/test-itis_ping.R
taxize/tests/testthat/test-ion.R
taxize/tests/testthat/test-downstream.R
taxize/tests/testthat/test-get_tpsid.R
taxize/tests/testthat/test-tax_agg.R
taxize/tests/testthat/test-tnrs.R
taxize/tests/testthat/test-rankagg.R
taxize/tests/testthat/test-tp_accnames.R
taxize/tests/testthat/test-itis_kingdomnames.R
taxize/tests/testthat/test-fungorum.R
taxize/tests/testthat/test-comm2sci.R
taxize/tests/testthat/test-vascan_search.r
taxize/tests/testthat/test-itis_downstream.R
taxize/tests/testthat/test-eol_search.R
taxize/tests/testthat/test-get_ids.R
taxize/tests/testthat/test-eol_pages.R
taxize/tests/testthat/test-col_downstream.R
taxize/tests/testthat/test-itis_getrecord.R
taxize/tests/testthat/test-tnrs_sources.R
taxize/tests/testthat/test-iucn_getname.R
taxize/tests/testthat/test-eol_ping.R
taxize/tests/testthat/test-plantminer.R
taxize/tests/testthat/test-gnr_resolve.R
taxize/tests/testthat/test-bold_search.R
taxize/tests/testthat/test-eubon.R
taxize/tests/testthat/test-class2tree.R
taxize/tests/testthat/test-tp_search.R
taxize/tests/testthat/test-itis_taxrank.R
taxize/tests/testthat/test-itis_native.R
taxize/tests/testthat/test-get_tsn.R
taxize/tests/testthat/test-eol_dataobjects.R
taxize/tests/testthat/test-itis_terms.R
taxize/tests/testthat/test-gni_details.R
taxize/tests/testthat/test-gnr_datasources.R
taxize/tests/testthat/test-tax_name.R
taxize/tests/testthat/test-itis_refs.R
taxize/tests/testthat/test-gbif_parse.R
taxize/tests/testthat/test-get_uid.R
taxize/tests/testthat/test-lowest_common.R
taxize/tests/testthat/test-ipni_search.R
taxize/tests/testthat/test-ncbi_get_taxon_summary.R
taxize/tests/testthat/test-itis_lsid.R
taxize/tests/testthat/test-get_eolid.R
taxize/tests/testthat/test-itis_hierarchy.R
taxize/tests/testthat/test-tp_refs.R
taxize/tests/testthat/test-get_gbifid.R
taxize/tests/testthat/test-get_colid.R
taxize/tests/testthat/test-itis_acceptname.R
taxize/tests/testthat/test-itis.R
taxize/tests/testthat/test-sci2comm.R
taxize/tests/testthat/test-classification.R
taxize/tests/testthat/test-gni_search.R
taxize/tests/testthat/test-tax_rank.R
taxize/tests/testthat/test-synonyms.R
taxize/tests/testthat/test-col_search.R
taxize/tests/testthat/test-names_list.R
taxize/tests/testthat/test-iucn_id.R
taxize/tests/testthat/test-apgscraping.R
taxize/tests/testthat/test-ncbi_children.R
taxize/tests/testthat/test-tp_dist.R
taxize/tests/testthat/test-get_boldid.R
taxize/tests/testthat/test-ping.R
taxize/tests/test-all.R
taxize/NAMESPACE
taxize/NEWS.md
taxize/data
taxize/data/rank_ref.RData
taxize/data/plantGenusNames.RData
taxize/data/theplantlist.RData
taxize/data/apg_families.RData
taxize/data/apg_orders.RData
taxize/data/plantNames.RData
taxize/R
taxize/R/eol_utiils.R
taxize/R/taxize-package.R
taxize/R/gisd_isinvasive.R
taxize/R/upstream.R
taxize/R/gbif_name_usage.R
taxize/R/itis_refs.R
taxize/R/col_search.R
taxize/R/ubio_synonyms.R
taxize/R/iucn_id.R
taxize/R/gni_parse.R
taxize/R/get_ubioid.R
taxize/R/nbn_search.R
taxize/R/itis_getrecord.R
taxize/R/apg_lookup.R
taxize/R/gni_helpers.R
taxize/R/get_ids.R
taxize/R/gnr_datasources.R
taxize/R/class2tree.R
taxize/R/nbn_classification.R
taxize/R/children.R
taxize/R/phylomatic_tree.R
taxize/R/tnrs.R
taxize/R/tp_dist.R
taxize/R/ubio_search.R
taxize/R/taxize_ldfast.R
taxize/R/eubon.R
taxize/R/synonyms.R
taxize/R/itis_native.R
taxize/R/phylomatic_format.R
taxize/R/resolve.R
taxize/R/eol_search.R
taxize/R/eol_dataobjects.R
taxize/R/tol_resolve.R
taxize/R/ping.R
taxize/R/tpl_families.r
taxize/R/ncbi_getbyid.R
taxize/R/plantminer.R
taxize/R/get_nbnid.R
taxize/R/get_gbifid.R
taxize/R/tp_synonyms.R
taxize/R/ubio_classification.R
taxize/R/ubio_classification_search.R
taxize/R/itis_lsid.R
taxize/R/gbif_helpers.R
taxize/R/rankagg.R
taxize/R/apg.R
taxize/R/eol_pages.R
taxize/R/ipni_search.R
taxize/R/sci2comm.R
taxize/R/gbif_parse.R
taxize/R/ncbi_getbyname.R
taxize/R/globals.R
taxize/R/get_eolid.R
taxize/R/taxize_capwords.r
taxize/R/get_colid.R
taxize/R/col_children.R
taxize/R/tnrs_sources.r
taxize/R/itis_downstream.R
taxize/R/itis-api.R
taxize/R/ncbi_children.R
taxize/R/names_list.r
taxize/R/downstream.R
taxize/R/bold_search.R
taxize/R/tpl_search.r
taxize/R/lowest_common.R
taxize/R/tp_accnames.R
taxize/R/scrapenames.r
taxize/R/itis_terms.R
taxize/R/get_uid.R
taxize/R/eol_invasive.R
taxize/R/get_tpsid.R
taxize/R/getkey.R
taxize/R/eol_hierarchy.R
taxize/R/classification.R
taxize/R/ion.R
taxize/R/col_classification.R
taxize/R/tax_name.R
taxize/R/itis_hierarchy.R
taxize/R/itis_taxrank.R
taxize/R/genbank2uid.R
taxize/R/comm2sci.R
taxize/R/status_codes.R
taxize/R/tp_refs.R
taxize/R/tax_rank.R
taxize/R/iucn_summary.R
taxize/R/fungorum.R
taxize/R/tpl_get.r
taxize/R/gnr_resolve.R
taxize/R/iucn_getname.R
taxize/R/get_boldid.R
taxize/R/rename.R
taxize/R/gni_details.R
taxize/R/ubio_id.R
taxize/R/tp_classification.R
taxize/R/itis_name.R
taxize/R/gni_search.R
taxize/R/tax_agg.R
taxize/R/tp_summary.R
taxize/R/col_downstream.R
taxize/R/tp_search.R
taxize/R/vascan_search.r
taxize/R/gbif_downstream.R
taxize/R/nbn_synonyms.R
taxize/R/iplant_resolve.R
taxize/R/itis_kingdomnames.R
taxize/R/zzz.R
taxize/R/ncbi_get_taxon_summary.R
taxize/R/get_tsn.R
taxize/R/ncbi_search.R
taxize/R/taxize_cite.R
taxize/R/itis_acceptname.R
taxize/R/itis.R
taxize/vignettes
taxize/vignettes/taxize_vignette.Rmd
taxize/vignettes/name_cleaning.Rmd
taxize/vignettes/taxize_infotable.Rmd
taxize/README.md
taxize/MD5
taxize/build
taxize/build/vignette.rds
taxize/DESCRIPTION
taxize/man
taxize/man/tp_refs.Rd
taxize/man/iucn_summary.Rd
taxize/man/getsynonymnamesfromtsn.Rd
taxize/man/fungorum.Rd
taxize/man/tax_agg.Rd
taxize/man/col_search.Rd
taxize/man/phylomatic_format-defunct.Rd
taxize/man/apg.Rd
taxize/man/getitistermsfromscientificname.Rd
taxize/man/itis-api.Rd
taxize/man/getscientificnamefromtsn.Rd
taxize/man/itis_getrecord.Rd
taxize/man/getitisterms.Rd
taxize/man/ncbi_get_taxon_summary.Rd
taxize/man/tp_search.Rd
taxize/man/iplant_resolve.Rd
taxize/man/sci2comm.Rd
taxize/man/children.Rd
taxize/man/getitistermsfromcommonname.Rd
taxize/man/get_tpsid.Rd
taxize/man/tnrs.Rd
taxize/man/get_tsn.Rd
taxize/man/iucn_getname.Rd
taxize/man/getjurisdictionvalues.Rd
taxize/man/iucn_id.Rd
taxize/man/ubio_id-defunct.Rd
taxize/man/ubio_ping-defunct.Rd
taxize/man/taxize-package.Rd
taxize/man/getkingdomnames.Rd
taxize/man/gbif_name_usage.Rd
taxize/man/getfullhierarchyfromtsn.Rd
taxize/man/nbn_classification.Rd
taxize/man/gni_parse.Rd
taxize/man/get_ids.Rd
taxize/man/nbn_synonyms.Rd
taxize/man/tp_dist.Rd
taxize/man/getpublicationsfromtsn.Rd
taxize/man/gettaxonomicranknamefromtsn.Rd
taxize/man/get_seqs-defunct.Rd
taxize/man/get_ubioid-defunct.Rd
taxize/man/eol_dataobjects.Rd
taxize/man/ion.Rd
taxize/man/itis_terms.Rd
taxize/man/gbif_parse.Rd
taxize/man/get_boldid.Rd
taxize/man/gettaxonauthorshipfromtsn.Rd
taxize/man/get_nbnid.Rd
taxize/man/getvernacularlanguages.Rd
taxize/man/searchbycommonnameendswith.Rd
taxize/man/getfullrecordfromlsid.Rd
taxize/man/get_eolid.Rd
taxize/man/itis_taxrank.Rd
taxize/man/taxize_capwords.Rd
taxize/man/apg_orders.Rd
taxize/man/getjurisdictionoriginvalues.Rd
taxize/man/getdatedatafromtsn.Rd
taxize/man/vascan_search.Rd
taxize/man/col_classification-defunct.Rd
taxize/man/tp_accnames.Rd
taxize/man/col_children.Rd
taxize/man/tp_acceptednames-deprecated.Rd
taxize/man/theplantlist.Rd
taxize/man/plantminer.Rd
taxize/man/apg_families.Rd
taxize/man/gnr_datasources.Rd
taxize/man/ipni_search.Rd
taxize/man/gethierarchydownfromtsn.Rd
taxize/man/getcredibilityratingfromtsn.Rd
taxize/man/get_genes-defunct.Rd
taxize/man/plantGenusNames.Rd
taxize/man/gnr_resolve.Rd
taxize/man/tp_namedistributions-deprecated.Rd
taxize/man/ubio_search-defunct.Rd
taxize/man/status_codes.Rd
taxize/man/itis_lsid.Rd
taxize/man/synonyms.Rd
taxize/man/gettsnfromlsid.Rd
taxize/man/comm2sci.Rd
taxize/man/phylomatic_tree-defunct.Rd
taxize/man/itis_hierarchy.Rd
taxize/man/getfullrecordfromtsn.Rd
taxize/man/getparenttsnfromtsn.Rd
taxize/man/getothersourcesfromtsn.Rd
taxize/man/getdescription.Rd
taxize/man/iucn_status.Rd
taxize/man/tol_resolve.Rd
taxize/man/eubon.Rd
taxize/man/rankagg.Rd
taxize/man/genbank2uid.Rd
taxize/man/tp_classification-defunct.Rd
taxize/man/searchforanymatchpaged.Rd
taxize/man/eol_search.Rd
taxize/man/getcurrencyfromtsn.Rd
taxize/man/getanymatchcount.Rd
taxize/man/getkey.Rd
taxize/man/tpl_families.Rd
taxize/man/getjurisdictionaloriginfromtsn.Rd
taxize/man/getunacceptabilityreasonfromtsn.Rd
taxize/man/searchbycommonnamebeginswith.Rd
taxize/man/getkingdomnamefromtsn.Rd
taxize/man/gni_search.Rd
taxize/man/bold_search.Rd
taxize/man/classification.Rd
taxize/man/upstream.Rd
taxize/man/itis_refs.Rd
taxize/man/gisd_invasive-defunct.Rd
taxize/man/getlsidfromtsn.Rd
taxize/man/searchforanymatch.Rd
taxize/man/ncbi_children.Rd
taxize/man/tpl_search-defunct.Rd
taxize/man/nbn_search.Rd
taxize/man/itis_downstream.Rd
taxize/man/tax_name.Rd
taxize/man/getglobalspeciescompletenessfromtsn.Rd
taxize/man/getcredibilityratings.Rd
taxize/man/lowest_common.Rd
taxize/man/tax_rank.Rd
taxize/man/getrecordfromlsid.Rd
taxize/man/getgeographicdivisionsfromtsn.Rd
taxize/man/scrapenames.Rd
taxize/man/eol_hierarchy-defunct.Rd
taxize/man/tp_namereferences-deprecated.Rd
taxize/man/resolve.Rd
taxize/man/get_uid.Rd
taxize/man/getreviewyearfromtsn.Rd
taxize/man/searchbycommonname.Rd
taxize/man/tp_synonyms.Rd
taxize/man/get_gbifid.Rd
taxize/man/getcommonnamesfromtsn.Rd
taxize/man/getranknames.Rd
taxize/man/gettaxonomicusagefromtsn.Rd
taxize/man/get_colid.Rd
taxize/man/getcoremetadatafromtsn.Rd
taxize/man/rank_ref.Rd
taxize/man/eol_pages.Rd
taxize/man/tnrs_sources.Rd
taxize/man/class2tree.Rd
taxize/man/itis_searchcommon.Rd
taxize/man/searchbyscientificname.Rd
taxize/man/itis_name-deprecated.Rd
taxize/man/taxize_cite.Rd
taxize/man/getcommentdetailfromtsn.Rd
taxize/man/ncbi_getbyid-defunct.Rd
taxize/man/apg_lookup.Rd
taxize/man/ubio_synonyms-defunct.Rd
taxize/man/ncbi_getbyname-defunct.Rd
taxize/man/gni_details.Rd
taxize/man/getacceptednamesfromtsn.Rd
taxize/man/itis_acceptname.Rd
taxize/man/ubio_classification_search-defunct.Rd
taxize/man/itis_native.Rd
taxize/man/gethierarchyupfromtsn.Rd
taxize/man/ubio_classification-defunct.Rd
taxize/man/getlastchangedate.Rd
taxize/man/downstream.Rd
taxize/man/gettsnbyvernacularlanguage.Rd
taxize/man/getexpertsfromtsn.Rd
taxize/man/plantNames.Rd
taxize/man/get_genes_avail-defunct.Rd
taxize/man/eol_invasive-defunct.Rd
taxize/man/ping.Rd
taxize/man/taxize-defunct.Rd
taxize/man/names_list.Rd
taxize/man/gbif_downstream.Rd
taxize/man/ncbi_search-defunct.Rd
taxize/man/getgeographicvalues.Rd
taxize/man/tpl_get.Rd
taxize/man/itis_kingdomnames.Rd
taxize/man/getcoveragefromtsn.Rd
taxize/man/taxize_ldfast.Rd
taxize/man/col_downstream.Rd
taxize/man/tp_summary.Rd
taxize/LICENSE