sphere: Sample (with noise) from a sphere

In tdaunif: Uniform Manifold Samplers for Topological Data Analysis

Sample (with noise) from a sphere

Description

These functions generate uniform samples from a sphere of radius 1 and dimension 2 in 3-space, or in arbitrary dimension in 1-higher-dimensional space, optionally with noise.

Usage

sample_2hemisphere(n, bins = 1L, sd = 0)

sample_2sphere(n, bins = 1L, sd = 0)

sample_sphere(n, dim = 1, sd = 0)

Arguments

n	Number of observations.
bins	Number of intervals per dimension to stratify by. Default set to 1, which generates a uniform sample.
sd	Standard deviation of (independent multivariate) Gaussian noise.
dim	Dimension of the sphere.

Details

The function sample_sphere() is adapted from sphereUnif() in the TDA package. It uses stats::rnorm() to sample from a multivariate Gaussian and normalizes the resulting coordinates.

The function sample_2hemisphere() uses an area-preserving parameterization of the upper hemisphere, and sample_2sphere() uses two of these samples, one reflected over the horizontal plane, to produce a sample from a sphere. The parameterization was derived through the method for sampling 2-manifolds as described by Arvo (2001).

References

J Arvo (2001) Stratified Sampling of 2-Manifolds. SIGRAPH 2001 (State of the Art in Monte Carlo Ray Tracing for Realistic Image Synthesis), Course Notes, Vol. 29. https://www.cs.princeton.edu/courses/archive/fall04/cos526/papers/course29sig01.pdf

Examples

set.seed(50253L)

# 1-sphere in 2-space
x <- sample_sphere(120, dim = 1, sd = .1)
pairs(x, asp = 1, pch = 19, cex = .5)

# 2-sphere in 3-space
x <- sample_sphere(120, dim = 2, sd = .1)
pairs(x, asp = 1, pch = 19, cex = .5)

# 3-sphere in 4-space
x <- sample_sphere(120, dim = 3, sd = .1)
pairs(x, asp = 1, pch = 19, cex = .5)

# 4-sphere in 5-space
x <- sample_sphere(120, dim = 4, sd = .1)
pairs(x, asp = 1, pch = 19, cex = .5)

tdaunif documentation built on Sept. 10, 2023, 5:07 p.m.