Man pages for tidyHeatmap
A Tidy Implementation of Heatmap

add_annotationadd_annotation
add_attrAdd attribute to abject
add_barAdds a bar annotation layer to a 'InputHeatmap', that on...
add_bar-methodsadd_bar
add_classAdd class to abject
add_lineAdds a line annotation layer to a 'InputHeatmap', that on...
add_line-methodsadd_line
add_point-methodsAdds a point annotation layer to a 'InputHeatmap', that on...
add_tile-methodsAdds a tile annotation layer to a 'InputHeatmap', that on...
annot_to_listannot_to_list
as_matrixGet matrix from tibble
check_if_counts_is_naCheck whether there are NA counts
check_if_duplicated_genesCheck whether there are duplicated genes/transcripts
check_if_wrong_inputCheck whether there are NA counts
drop_classRemove class to abject
error_if_log_transformedCheck whether a numeric vector has been log transformed
get_abundance_norm_if_existsGet column names either from user or from attributes
get_elementsGet column names either from user or from attributes
get_elements_featuresGet column names either from user or from attributes
get_elements_features_abundanceGet column names either from user or from attributes
get_sample_countsGet column names either from user or from attributes
get_sample_transcriptGet column names either from user or from attributes
get_sample_transcript_countsGet column names either from user or from attributes
get_x_y_annotation_columnsget_x_y_annotation_columns
heatmap-methodsCreates a 'InputHeatmap' object from 'tbl_df' on evaluation...
ifelse2_pipeThis is a generalisation of ifelse that accepts an object and...
ifelse_pipeThis is a generalisation of ifelse that accepts an object and...
input_heatmapinput_heatmap
layer-methodsAdds a layers of symbols above the heatmap tiles to a...
N52Example data set N52
parse_formula.formula parser
pasillaExample data set Pasilla
prependFrom rlang deprecated
quo_namesConvert array of quosure (e.g. c(col_a, col_b)) into...
save_pdf-Heatmap-methodsave_pdf
save_pdf-InputHeatmap-methodsave_pdf
save_pdf-methodsSave plot on PDF file
scale_designScale design matrix
scale_robustScale counts in a robust way against sd == 0
select_closest_pairsSub function of...
split-methodsSplit the heatmap row-wise depending on the biggest branches...
tidyHeatmap documentation built on July 7, 2021, 9:07 a.m.