| ggfboxplot | R Documentation |
tf objectsDraw functional boxplots based on functional depth rankings.
stat_fboxplot(
mapping = NULL,
data = NULL,
geom = "fboxplot",
position = "identity",
...,
orientation = NA,
coef = 1.5,
na.rm = FALSE,
show.legend = NA,
inherit.aes = TRUE,
depth = "MBD",
depth_fn = NULL,
fence_fn = NULL,
central = 0.5,
arg = NULL
)
geom_fboxplot(
mapping = NULL,
data = NULL,
stat = "fboxplot",
position = "identity",
...,
outliers = TRUE,
outlier.colour = NULL,
outlier.color = NULL,
outlier.fill = NULL,
outlier.shape = NULL,
outlier.size = NULL,
outlier.stroke = 0.5,
outlier.alpha = NULL,
whisker.colour = NULL,
whisker.color = NULL,
whisker.linetype = NULL,
whisker.linewidth = NULL,
staple.colour = NULL,
staple.color = NULL,
staple.linetype = NULL,
staple.linewidth = NULL,
median.colour = NULL,
median.color = NULL,
median.linetype = NULL,
median.linewidth = NULL,
box.colour = NULL,
box.color = NULL,
box.linetype = NULL,
box.linewidth = NULL,
notch = FALSE,
notchwidth = 0.5,
staplewidth = 0,
varwidth = FALSE,
na.rm = FALSE,
orientation = NA,
show.legend = NA,
inherit.aes = TRUE,
depth = "MBD",
depth_fn = NULL,
fence_fn = NULL,
central = 0.5,
arg = NULL
)
mapping, data, position, show.legend, inherit.aes, na.rm, orientation, ... |
Passed on to |
coef |
Inflation factor for the central envelope used to define outer fences, defaults to 1.5. |
depth |
Character scalar naming the built-in depth measure passed to
|
depth_fn |
Optional custom depth function. Must return one numeric depth value per function. |
fence_fn |
Optional custom fence function. Must return a list with
elements |
central |
Fraction of deepest curves used to construct the central
envelope. Defaults to |
arg |
Optional evaluation grid used for depth calculation, envelopes, and
drawing. Defaults to the natural grid of the mapped |
stat, geom |
Use the functional boxplot stat/geom. |
outliers |
Should outlying curves be drawn? |
outlier.colour, outlier.color, outlier.fill, outlier.shape, outlier.size |
Styling parameters for outlier curves. |
outlier.stroke |
Accepted for interface compatibility with
|
outlier.alpha |
Alpha used for outlier curves. |
whisker.colour, whisker.color, whisker.linetype, whisker.linewidth |
Styling parameters for fence lines. |
staple.colour, staple.color, staple.linetype, staple.linewidth |
Accepted for
interface compatibility with |
median.colour, median.color, median.linetype, median.linewidth |
Styling parameters for the median curve. |
box.colour, box.color, box.linetype, box.linewidth |
Styling parameters for the central band outline. |
notch, notchwidth, staplewidth, varwidth |
Accepted for interface
compatibility with |
stat_fboxplot() computes a median curve (thick line), a central region
envelope (filled ribbon), functional fences (dashed lines), and optional
outlying curves (defined as "exceeds the fences somewhere", plotted as solid lines)
from a tf column. geom_fboxplot() draws these summaries as a band plus
line layers.
The interface intentionally follows ggplot2::stat_boxplot() and
ggplot2::geom_boxplot() where this is meaningful for functional data.
Use aes(tf = f) to map a tf column. Separate functional boxplots inside a
panel are defined by group, colour/color, or fill; separate panels are
handled through facetting. Note that only color or fill need to be
specified explicitly, as the other will be automatically mapped to the same
variable if not provided.
A ggplot2 layer.
library(ggplot2)
set.seed(1312)
data <- data.frame(id = 1:50, grp = rep(c("A", "B"), each = 25))
data$f <- tf_rgp(50) + 5 * (data$grp == "A")
tf_ggplot(data, aes(tf = f, fill = grp)) + # same as `colour = grp` here!
geom_fboxplot(alpha = 0.3)
tf_ggplot(data, aes(tf = f)) +
geom_fboxplot(orientation = "y")
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