Description Usage Arguments Examples
Calculates the complement to the intervals covered by the intervals in
a data frame. It can optionally take a chromosome_size
data frame
that contains 2 or 3 columns, the first the names of chromosome and in case
there are 2 columns the size or first the start index and lastly the end index
on the chromosome.
1 | genome_complement(x, chromosome_size = NULL, by = NULL)
|
x |
A data frame for which the complement is calculated |
chromosome_size |
A dataframe with at least 2 columns that contains
first the chromosome name and then the size of that chromosome. Can be NULL
in which case the largest value per chromosome from |
by |
A character vector with 3 entries which are the chromosome, start and end column.
For example: |
1 2 3 4 5 6 7 8 |
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