read_q_files: Read and structure .Q files or existing matrices as...
In tidypopgen: Tidy Population Genetics
read_q_files R Documentation
Read and structure .Q files or existing matrices as q_matrix or gt_admix
objects.
Description
This function reads .Q matrix files generated by external clustering
algorithms (such as ADMIXTURE) and transforms them into gt_admix objects.
Usage
read_q_files(x)
Arguments
x
can be:
a path to a directory containing .Q files
Value
a gt_admix object containing a list of Q matrices and a list of
indices for each Q matrix separated by K
Examples
q_files_path <- system.file("extdata", "anolis", package = "tidypopgen")
admix_obj <- read_q_files(q_files_path)
summary(admix_obj)
tidypopgen documentation built on Aug. 28, 2025, 1:08 a.m.
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| read_q_files | R Documentation |
Read and structure .Q files or existing matrices as q_matrix or gt_admix
objects.
Description
This function reads .Q matrix files generated by external clustering
algorithms (such as ADMIXTURE) and transforms them into gt_admix objects.
Usage
read_q_files(x)
Arguments
x |
can be:
|
Value
a
gt_admixobject containing a list of Q matrices and a list of indices for each Q matrix separated by K
Examples
q_files_path <- system.file("extdata", "anolis", package = "tidypopgen")
admix_obj <- read_q_files(q_files_path)
summary(admix_obj)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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