timeROC: Time-Dependent ROC Curve and AUC for Censored Survival Data
Version 0.3

Estimation of time-dependent ROC curve and area under time dependent ROC curve (AUC) in the presence of censored data, with or without competing risks. Confidence intervals of AUCs and tests for comparing AUCs of two rival markers measured on the same subjects can be computed, using the iid-representation of the AUC estimator. Plot functions for time-dependent ROC curves and AUC curves are provided. Time-dependent Positive Predictive Values (PPV) and Negative Predictive Values (NPV) can also be computed.

Browse man pages Browse package API and functions Browse package files

AuthorPaul Blanche
Date of publication2015-03-25 00:27:15
MaintainerPaul Blanche <paulfblanche@gmail.com>
LicenseGPL (>= 2)
Version0.3
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("timeROC")

Man pages

compare: Compute tests for comparing two time-dependent AUC
confint: Confidence intervals for areas under time-dependent ROC...
Melano: Malignant melanoma data
Paquid: Paquid cohort data
plot: Plot function for time-dependent ROC curve
plotAUCcurve: Plot time-dependent AUC curve
plotAUCcurveDiff: Plot the curve of the difference of two time-dependent AUCs...
print: Print objects in the timeROC library
SeSpPPVNPV: Time-dependent Sensitivity (Se), Specificity (Sp), Positive...
timeROC: Time-dependent ROC curve estimation

Functions

Compute.iid.KM Source code
Melano Man page
Paquid Man page
SeSpPPVNPV Man page Source code
compare Man page Source code
compute_iid_decomposition Source code
compute_iid_decomposition_competing_risks Source code
compute_iid_decomposition_survival Source code
confint.ipcwcompetingrisksROC Man page Source code
confint.ipcwsurvivalROC Man page Source code
plot.ipcwcompetingrisksROC Man page Source code
plot.ipcwsurvivalROC Man page Source code
plotAUCcurve Man page Source code
plotAUCcurveDiff Man page Source code
print.ipcwcompetingrisksROC Man page Source code
print.ipcwcompetingrisksSeSpPPVNPV Man page Source code
print.ipcwsurvivalROC Man page Source code
print.ipcwsurvivalSeSpPPVNPV Man page Source code
timeROC Man page Source code

Files

inst
inst/CITATION
NAMESPACE
NEWS
data
data/Melano.RData
data/Paquid.RData
R
R/plot.ipcwcompetingrisksROC.R
R/plot.ipcwsurvivalROC.R
R/print.ipcwcompetingrisksSeSpPPVNPV.R
R/print.ipcwcompetingrisksROC.R
R/confint_ipcwROC.R
R/timeROC_3.R
R/compute_iid_rep_2.R
R/plotAUCcurve.R
R/print.ipcwsurvivalROC.R
R/plotAUCcurveDiff.R
R/compare_ipcwROC.R
R/SeSpPPVNPV.R
R/ComputeIIDKM.R
R/compute_iid_ac_competing_risks.R
R/compute_iid_ss_competing_risks_2.R
R/print.ipcwsurvivalSeSpPPVNPV.R
MD5
DESCRIPTION
THANKS
man
man/timeROC.Rd
man/SeSpPPVNPV.Rd
man/Paquid.Rd
man/confint.Rd
man/plotAUCcurveDiff.Rd
man/compare.Rd
man/print.Rd
man/plot.Rd
man/plotAUCcurve.Rd
man/Melano.Rd
timeROC documentation built on May 19, 2017, 6:22 p.m.