timeordered: Time-ordered and time-aggregated network analyses
Version 0.9.8

Methods for incorporating time into network analysis. Construction of time-ordered networks (temporal graphs). Shortest-time and shortest-path-length analyses. Resource spread calculations. Data resampling and rarefaction for null model construction. Reduction to time-aggregated networks with variable window sizes; application of common descriptive statistics to these networks. Vector clock latencies. Plotting functionalities.

AuthorBenjamin Blonder
Date of publication2015-01-22 09:25:27
MaintainerBenjamin Blonder <bblonder@gmail.com>
LicenseGPL-3
Version0.9.8
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("timeordered")

Getting started

Package overview

Popular man pages

ants: Ant interaction data
generatetimelags: Constructs matrix of increasingly large time windows suitable...
plottanet: Plots a time-aggregated network.
plottonet: Plots a time-ordered network.
randomly_permuted_times: Randomize temporal networks
rarefy: Simulates the effect of insufficient sampling by data...
shortesthoppath: Determines a path (shortest by the least number of unique...
See all...

All man pages Function index File listing

Man pages

ants: Ant interaction data
applynetworkfunction: Applies a function (typically a descriptive statistic) to...
generatelatencies: Generates vector-clock latencies for each individual at each...
generatenetworkslices: Generates multiple time-aggregated networks from a...
generatetimeaggregatednetwork: Constructs a weighted time-aggregated network from a...
generatetimedeltas: Constructs matrix of sequential time windows suitable for...
generatetimelags: Constructs matrix of increasingly large time windows suitable...
generatetonetwork: Generates a time-ordered network from an interaction list.
generatetonetworkfromvel: Generates a time-ordered network from a data frame listing...
generatevertexedgelist: Generates a data frame listing all directed edges in a...
maxpoints: Determines the maximum value of each row of a matrix; used as...
midpoints: Determines the mean value of each row of a matrix; used as a...
plotnetworkslices: Plots a time-aggregated network
plottanet: Plots a time-aggregated network.
plottonet: Plots a time-ordered network.
randomize_edges_helper: Does all the work for 'edge_randomization' and...
randomizeidentities: Resamples data based on vertex identity.
randomizetimes: Resamples data based on event time.
randomly_permuted_times: Randomize temporal networks
rarefy: Simulates the effect of insufficient sampling by data...
shortesthoppath: Determines a path (shortest by the least number of unique...
shortesttimepath: Determines a path (shortest by the least time) between a...
spreadanalysis: Simulates the perfect spread of a resource on a time-ordered...
swap: Swaps two elements in a data frame. An internal function.
timeordered-package: Time-ordered and time-aggregated network analyses
transformspreadbyindividual: A helper function to assess differences in spreading...

Functions

ants Man page
applynetworkfunction Man page Source code
contact_randomization Man page Source code Source code
edge_randomization Man page Source code Source code
generatelatencies Man page Source code
generatenetworkslices Man page Source code
generatetimeaggregatednetwork Man page Source code
generatetimedeltas Man page Source code
generatetimelags Man page Source code
generatetonetwork Man page Source code
generatetonetworkfromvel Man page Source code
generatevertexedgelist Man page Source code
maxpoints Man page Source code
midpoints Man page Source code
plotnetworkslices Man page Source code
plottanet Man page Source code
plottonet Man page Source code
random_times Man page Source code Source code
randomize_edges_helper Man page Source code Source code
randomized_contacts Man page Source code Source code
randomized_edges Man page Source code Source code
randomizeidentities Man page Source code
randomizetimes Man page Source code
randomly_permuted_times Man page Man page Source code Source code
rarefy Man page Source code
shortesthoppath Man page Source code
shortesttimepath Man page Source code
spreadanalysis Man page Source code
swap Man page Source code Source code
time_reversal Man page Source code Source code
timeordered Man page
timeordered-package Man page
total_randomization Man page Source code
transformspreadbyindividual Man page Source code
vertex_randomization Man page Source code

Files

NAMESPACE
data
data/ants.rda
R
R/generatetonetwork.R
R/midpoints.R
R/plottonet.R
R/randomizetimes.R
R/timeordered-internal.R
R/rarefy.R
R/null_models.R
R/randomizeidentities.R
R/transformspreadbyindividual.R
R/generatetimedeltas.R
R/spreadanalysis.R
R/plotnetworkslices.R
R/generatelatencies.R
R/shortesthoppath.R
R/generatetimelags.R
R/generatenetworkslices.R
R/randomization_procedures.R
R/applynetworkfunction.R
R/maxpoints.R
R/shortesttimepath.R
R/generatevertexedgelist.R
R/generatetonetworkfromvel.R
R/plottanet.R
R/generatetimeaggregatednetwork.R
MD5
DESCRIPTION
man
man/generatetonetworkfromvel.Rd
man/swap.Rd
man/generatenetworkslices.Rd
man/generatetimedeltas.Rd
man/randomizetimes.Rd
man/generatelatencies.Rd
man/timeordered-package.Rd
man/rarefy.Rd
man/generatevertexedgelist.Rd
man/generatetimelags.Rd
man/plottanet.Rd
man/randomize_edges_helper.Rd
man/midpoints.Rd
man/generatetimeaggregatednetwork.Rd
man/plottonet.Rd
man/randomly_permuted_times.Rd
man/shortesttimepath.Rd
man/plotnetworkslices.Rd
man/transformspreadbyindividual.Rd
man/shortesthoppath.Rd
man/randomizeidentities.Rd
man/maxpoints.Rd
man/applynetworkfunction.Rd
man/spreadanalysis.Rd
man/ants.Rd
man/generatetonetwork.Rd
timeordered documentation built on May 19, 2017, 6:13 p.m.

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