timetree.phylo: Lockup divergence time from TIME TREE for a phylogeny
In timetree: Interface to the TimeTree of Life Webpage
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Lockup divergence time from TIME TREE for the nodes of a given phylogeny
Usage
1
timetree.phylo(phy, node.time=c("expert","mean","median"))
Arguments
phy
an object of class phylo
node.time
a character specifying which time should be used as node.labels
Value
an object of class list
age
a data.frame of mode list with divergence times for $tip.label
phy
an object of class "phylo" with new node labels according to node.times
Author(s)
Franz-Sebastian Krah
Examples
1
2
3
# data(dikarya)
# a <- timetree.phylo(dikarya, node.time="mean")
# plot(a$phy, show.node.label=TRUE)
Example output
timetree documentation built on May 1, 2019, 11:52 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
Lockup divergence time from TIME TREE for the nodes of a given phylogeny
Usage
1 | timetree.phylo(phy, node.time=c("expert","mean","median"))
|
Arguments
phy |
an object of class |
node.time |
a character specifying which time should be used as |
Value
an object of class list
age |
a data.frame of mode |
phy |
an object of class |
Author(s)
Franz-Sebastian Krah
Examples
1 2 3 | # data(dikarya)
# a <- timetree.phylo(dikarya, node.time="mean")
# plot(a$phy, show.node.label=TRUE)
|
Example output
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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