plot.bootTreedater: Plots lineages through time and confidence intervals...

In treedater: Fast Molecular Clock Dating of Phylogenetic Trees with Rate Variation

Description

Plots lineages through time and confidence intervals estimated by bootstrap.

Usage

## S3 method for class 'bootTreedater'
plot(x, t0 = NA, res = 100, ggplot = FALSE,
  cumulative = FALSE, ...)

Arguments

x	A bootTreedater object produced by *parboot* or *boot*
t0	The lower bound of the time axis to show
res	The number of time points on the time axis
ggplot	If TRUE, will return a plot made with the ggplot2 package
cumulative	If TRUE, will show only decreasing lineages through time
...	Additional arg's are passed to *ggplot* or *plot*

treedater documentation built on Jan. 27, 2020, 1:06 a.m.