moodyContactSim: Jim Moody's example dynamic contact simulation network

In tsna: Tools for Temporal Social Network Analysis

Description

A networkDynamic object containing the output of a simulation of 1000 timestep simulation of a sex contact network with 16 vertices and 18 edges. Each edge has a single activity spell.

Usage

data(moodyContactSim)

Format

A networkDynamic object.

Details

The object has a net.obs.period attribute describing the observation model. This is a useful network for testing path-based algorithms because it is small enough to visually inspect.

Source

Figure 5 of James Moody (2008) "Static Representations of Dynamic Networks" Duke Population Research Institute On-line Working Paper Series. http://www.soc.duke.edu/~jmoody77/StatDyn_5.pdf

Examples

data(moodyContactSim)
# plot a view of network with edge and vertex labels
plot(moodyContactSim,
     displaylabels=TRUE,
     label.cex=0.8,
     label.pos=5,
     vertex.col='white',
     vertex.cex=2,
     edge.label=sapply(get.edge.activity(moodyContactSim),function(e){
       paste('(',e[,1],'-',e[,2],')',sep='')
     }),
     edge.label.col='blue',
     edge.label.cex=0.8
   )
## Not run: 
# data object was created with
moodyContactSim<-network.initialize(16,directed=FALSE)
tel<-matrix(c(674,701,1,9,
              214,247,1,11,
              621,651,1,12,
              583,615,1,16,
              749,793,11,8,
              719,745,8,13,
              712,739,13,5,
              634,660,13,3,
              769,795,13,7,
              453,479,13,4,
              494,524,13,2,
              224,256,7,10,
              40,72,10,4,
              665,692,4,14,
              709,740,2,15,
              575,599,2,16,
              748,782,4,16,
              701,733,16,6),
            ncol=4,byrow=TRUE)
moodyContactSim<-networkDynamic(moodyContactSim,edge.spells=tel)
obs<-moodyContactSim%n%'net.obs.period'
obs$mode<-'discrete'
obs$time.increment<-1
obs$time.unit<-'step'
obs$observations<-list(c(0,1000))
moodyContactSim%n%'net.obs.period'<-obs

## End(Not run)   

Example output

Loading required package: network
network: Classes for Relational Data
Version 1.15 created on 2019-04-01.
copyright (c) 2005, Carter T. Butts, University of California-Irvine
                    Mark S. Handcock, University of California -- Los Angeles
                    David R. Hunter, Penn State University
                    Martina Morris, University of Washington
                    Skye Bender-deMoll, University of Washington
 For citation information, type citation("network").
 Type help("network-package") to get started.

Loading required package: networkDynamic

networkDynamic: version 0.10.0, created on 2019-04-04
Copyright (c) 2019, Carter T. Butts, University of California -- Irvine
                    Ayn Leslie-Cook, University of Washington
                    Pavel N. Krivitsky, University of Wollongong
                    Skye Bender-deMoll, University of Washington
                    with contributions from
                    Zack Almquist, University of California -- Irvine
                    David R. Hunter, Penn State University
                    Li Wang
                    Kirk Li, University of Washington
                    Steven M. Goodreau, University of Washington
                    Jeffrey Horner
                    Martina Morris, University of Washington
Based on "statnet" project software (statnet.org).
For license and citation information see statnet.org/attribution
or type citation("networkDynamic").

Created net.obs.period to describe network
 Network observation period info:
  Number of observation spells: 1 
  Maximal time range observed: 40 until 795 
  Temporal mode: continuous 
  Time unit: unknown 
  Suggested time increment: NA 

tsna documentation built on Nov. 1, 2021, 5:06 p.m.