| as.clipper | As Clipper |
| clipmask-class | Class holding info for the clipper |
| clipper | Clipper |
| get_profile | Get profile |
| highlight_substance | Highlight a selected substance |
| mask_sam | Mask SAM |
| matrix_sam | Perform SAM between to matrices |
| mosaic_chunk | Mosaic chunk |
| mosaic_compose | Mosaic compose |
| mosaic_info | Mosaic Info |
| mosaic_sam | Mosaic SAM |
| plot_tile | Plotting Objects |
| preprocess | Tile Preprocess |
| primpke | Example library |
| SAM-class | Sam Prediction |
| sam_load | Sam load |
| sam_write | Write a sam object to disk |
| Smooth-class | Smooth |
| smooth_sam | Smooth a Spectral Angle Mapper output |
| SpectralInfo-class | Spectral info |
| SpectralPack-class | Spectral Pack |
| SpectralReference-class | Spectral Reference Class |
| summary_sam | Method to summarize 'SAM' or 'Smooth' objects. |
| tile_base_corr | Baseline correction |
| Tile-class | Tile |
| tile_read | Single tile read |
| tile_sam | Spectral Angle Mapper |
| toClip | Visual clipper |
| uFTIR | Process and analyze Agilent Cary 620 FTIR Microscope images |
| wavealign | Methods to resample the wavenumbers |
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