mosaic_chunk: Mosaic chunk

In uFTIR: Process and Analyze Agilent Cary 620 FTIR Microscope Images

Description

The function read a single mosaic tile (.dmd file extension) using a SpectralInfo object as a guide to find the file. It returns an object of class Tile, which can be (pre/post)processed as if it were a single tile.

Usage

mosaic_chunk(info, path, dmdfile, fpa, wl)

Arguments

info	Optional. SpectralInfo object.
path	Optional. Path to dmdfile. Overwrites the path on the info object.
dmdfile	Target *.dmd file to read.
fpa	If info is missing, you should indicate the fpa size of the chunk.
wl	If info is missing, you should indicate the wavenumbers at which you read your data

Value

A Tile object.

Examples

x <- mosaic_info(base::system.file("extdata/mosaic.dmt", package = "uFTIR"))
y <- mosaic_chunk(info = x, dmdfile = "mosaic_0000_0000.dmd")
class(y)

uFTIR documentation built on Oct. 25, 2021, 9:08 a.m.