uHMM: Construct an Unsupervised Hidden Markov Model
Version 1.0

Construct a Hidden Markov Model with states learnt by unsupervised classification.

AuthorEmilie POISSON-CAILLAULT [aut], Paul TERNYNCK [aut, cre]
Date of publication2016-04-22 16:25:47
MaintainerPaul TERNYNCK <ternynck@lisic.univ-littoral.fr>
LicenseGPL (>= 2)
Version1.0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("uHMM")

Getting started

Package overview

Popular man pages

emissionMatrix: Emission matrix estimation
HMMparams: Hidden Markov Model parameter estimation
spectralPamClusteringNg: spectralPamClusteringNg function
transitionMatrix: Transition matrix estimation
uHMMinterface: Graphical Interface to Build an uHMM
uHMM-package: Construct an unsupervised Hidden Markov Model
ZPGaussianSimilarity: Similarity matrix with local scale parameter
See all...

All man pages Function index File listing

Man pages

computeGap: Compute gap between eigenvalues of a similarity matrix
cutCalculation: cutCalculation function
emissionMatrix: Emission matrix estimation
FastSpectralNJW: Jordan Fast Spectral Algorithm
HMMparams: Hidden Markov Model parameter estimation
KmeansAutoElbow: KmeansAutoElbow function
KpartitionNJW: KpartitionNJW function
MarelCarnot: MarelCarnot dataset
selfKNN: Self KNN
spectralPamClusteringNg: spectralPamClusteringNg function
transitionMatrix: Transition matrix estimation
uHMMinterface: Graphical Interface to Build an uHMM
uHMM-package: Construct an unsupervised Hidden Markov Model
ZPGaussianSimilarity: Similarity matrix with local scale parameter

Functions

FastSpectralNJW Man page Source code
HMMparams Man page Source code
KmeansAutoElbow Man page Source code
KpartitionNJW Man page Source code
MarelCarnot Man page
MarkovViterbiEstimation Source code
PCAwindow Source code
ZPGaussianSimilarity Man page Source code
boxplotWindow Source code
classifKmeans Source code
classificationTab_expert Source code
classificationTab_standard Source code
computeGap Man page Source code
cutCalculation Man page Source code
dateProcessing Source code
emissionMatrix Man page Source code
firstTab Source code
graphicsByState Source code
kppvObsCentre Source code
languageManagement Source code
logoFrame Source code
modelingTab Source code
mportFile Source code
mportResults Source code
mportTab Source code
periodSelectionFrame Source code
predictionTab Source code
representationPlot Source code
saveDirectory Source code
savePlot Source code
selfKNN Man page Source code
spectralClassifGT20000 Source code
spectralClassifLT20000 Source code
spectralPamClusteringNg Man page Source code
transitionMatrix Man page Source code
uHMM-package Man page
uHMMinterface Man page Source code
uHMMprediction Source code
unFixdata Source code
unSummary Source code
variableTab Source code

Files

inst
inst/figures
inst/figures/hourglass.gif
inst/figures/schema_hmm_EN.gif
inst/figures/data.gif
inst/figures/save.gif
inst/figures/schema_hmm_FR.gif
inst/figures/import.gif
inst/figures/flecheBas.gif
inst/figures/fix.gif
inst/figures/AeapLogo.gif
inst/figures/run.gif
inst/figures/loupe.gif
inst/figures/LisicLogo.gif
inst/figures/IfremerLogo.gif
inst/figures/UlcoLogo.gif
NAMESPACE
data
data/MarelCarnot.rda
data/datalist
R
R/1uHMMinterface.r
R/classifKmeans.r
R/HMMparams.r
R/importFile.r
R/firstTab.r
R/representationPlotFonction.r
R/saveDirectory.r
R/LabelsLanguages.r
R/ZZglobalVars.r
R/classifSpectral20000.r
R/calculFastSpectral_p.r
R/analyseParametresParClasse.r
R/selfKNN.r
R/fonctionKppvObsCentre.r
R/5classificationTab_expert.r
R/4classificationTab_standard.r
R/7predictionTab.r
R/importResults.r
R/dateProcessing.r
R/3variableTab.r
R/periodSelectionFrame.r
R/logoFrame.r
R/6modelingTab.r
R/unSummary.r
R/prediction.r
R/fonctionMarkovViterbiEstimation.r
R/2importTab.r
MD5
DESCRIPTION
man
man/transitionMatrix.Rd
man/ZPGaussianSimilarity.Rd
man/MarelCarnot.Rd
man/HMMparams.Rd
man/KmeansAutoElbow.Rd
man/cutCalculation.Rd
man/KpartitionNJW.Rd
man/FastSpectralNJW.Rd
man/emissionMatrix.Rd
man/spectralPamClusteringNg.Rd
man/selfKNN.Rd
man/uHMM-package.Rd
man/computeGap.Rd
man/uHMMinterface.Rd
uHMM documentation built on May 19, 2017, 10:13 p.m.

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