extract_aquisition_params: Extract Acquisition Parameters from a Bruker PDF Report

In ume: Ultrahigh-Resolution Mass Spectrometry Data Evaluation for Complex Organic Matter

Extract Acquisition Parameters from a Bruker PDF Report

Description

This function reads a PDF file from Bruker Compass DataAnalysis reports, extracts acquisition parameters, including the spectrum filename and analysis method, and returns them as a data.table. Parameter values are separated into numeric values and corresponding units.

Usage

extract_aquisition_params(pdf_path)

Arguments

pdf_path

Character. Path to the PDF file.

Value

A data.table with columns: Parameter, Value, Unit, Spectrum_Filename, Analysis_Method.

See Also

Other internal functions: create_custom_formula_library(), extract_aquisition_params_from_folder(), extract_metadata_from_ufz_files(), read_xml_peaklist()

ume documentation built on Dec. 13, 2025, 1:06 a.m.