vegdata: Access Vegetation Databases and Treat Taxonomy
Version 0.9

Handling of vegetation data from Turboveg () and other sources (). Taxonomic harmonization given appropriate taxonomic lists (e.g. the German taxonomical standard list "GermanSL", ).

Browse man pages Browse package API and functions Browse package files

AuthorFlorian Jansen <jansen@uni-greifswald.de>
Date of publication2016-07-15 10:31:42
MaintainerFlorian Jansen <jansen@uni-greifswald.de>
LicenseGPL (>= 2)
Version0.9
URL http://www.botanik.uni-greifswald.de/GermanSL.html
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("vegdata")

Man pages

elbaue: Species Data and Altitude from floodplains of the river Elbe,...
isc: Indicate site conditions with community weighted mean values...
lc: Templates for pseudo-species according to Turboveg layer...
monotypic: Creates a list of (regional) monotypic taxa from the given...
syntab: Syntaxonomic frequency tables
tax: Query of Turboveg 2 taxonomic reference lists including (if...
taxval: Handling of taxonomy in vegetation data.
tv.biblio: Check bibliographic references from Turboveg codes
tv.comprefl: Compare different taxonomical reference lists.
tv.coverperc: Cover code translation
tv.metadata: Show metainfo of vegetation database or ecodbase
tv.obs: Dataframe of plot-species observations directly from Turboveg
tv.site: Load site data from Turboveg Database
tv.traits: Load species traits from Turboveg reference list
tv.veg: Tabulates vegetation tables from Turboveg database
tv.write: Write species-plot observations and site information to...
vegdata-internal: Internal vegdata functions
vegdata-package: Functions to access data from vegetation databases and...
vegetweb: Retrieve data from vegetweb

Functions

TCS.replace Man page Source code
TV.replace Source code
agg Source code
cbind.df Source code
child Man page Source code
childs Man page Source code
comb.species Man page Source code
elbaue Man page
elbaue.env Man page
first.word Man page Source code
freqtab Man page
isc Man page Source code
lc Man page
lc.0 Man page
lc.1 Man page
lc.all Man page
load.taxlist Man page Source code
meanTraits Man page Source code
monotypic Man page Source code
onAttach Source code
parent Man page Source code
parents Man page Source code
print.syntab Man page Source code
rbind.df Source code
reShape.veg Man page Source code
showindiplot Man page Source code
showplot Man page Source code
syn Man page Source code
syntab Man page Source code
tax Man page
tax.default Man page Source code
tax.veg Man page Source code
taxname.abbr Man page Source code
taxname.simplify Man page Source code
taxval Man page Source code
tv.biblio Man page Source code
tv.compRefl Man page Source code
tv.coverperc Man page Source code
tv.db Man page Source code
tv.dict Man page Source code
tv.eco Man page Source code
tv.home Man page Source code
tv.metadata Man page Source code
tv.mono Man page Source code
tv.obs Man page
tv.refl Man page Source code
tv.site Man page Source code
tv.taxval Man page Source code
tv.traits Man page Source code
tv.veg Man page Source code
tv.write Man page Source code
vegdata Man page
vegdata-package Man page
vegetweb Man page
vw.biblio Man page
vw.obs Man page
vw.site Man page Source code
vw.survey Man page Source code
vw.veg Man page Source code

Files

inst
inst/CITATION
inst/tvdata
inst/tvdata/Popup
inst/tvdata/Popup/tvscale.dbf
inst/tvdata/Popup/tvrefenc.dbf
inst/tvdata/Species
inst/tvdata/Species/TaxrefExample.zip
inst/tvdata/Species/README
inst/tvdata/Data
inst/tvdata/Data/elbaue
inst/tvdata/Data/elbaue/metadata.txt
inst/tvdata/Data/elbaue/tvwin.dbf
inst/tvdata/Data/elbaue/remarks.dbf
inst/tvdata/Data/elbaue/TvAdmin.dbf
inst/tvdata/Data/elbaue/tvhabita.dbf
inst/tvdata/Data/elbaue/tvabund.dbf
inst/tvdata/Data/elbaue/tvwin.set
inst/tvdata/Data/elbaue.xml
inst/tvdata/Data/taxatest
inst/tvdata/Data/taxatest/metadata.txt
inst/tvdata/Data/taxatest/tvwin.dbf
inst/tvdata/Data/taxatest/remarks.dbf
inst/tvdata/Data/taxatest/TvAdmin.dbf
inst/tvdata/Data/taxatest/tvhabita.dbf
inst/tvdata/Data/taxatest/tvabund.dbf
inst/tvdata/Data/taxatest/tvwin.set
inst/ChangeLog
inst/doc
inst/doc/vegdata.Rnw
inst/doc/vegdata.R
inst/doc/vegdata.pdf
tests
tests/testthat.R
tests/testthat
tests/testthat/obs.rds
tests/testthat/test.R
NAMESPACE
data
data/lc.all.csv.gz
data/lc.1.csv.gz
data/lc.0.csv.gz
R
R/tv.coverperc.r
R/isc.r
R/tax_add.r
R/syntab.r
R/child.r
R/monotypic.r
R/comb.species.r
R/taxval.r
R/tv.compRefl.r
R/reShape.veg.r
R/tv.veg.r
R/tv.home.r
R/vegetweb.r
R/tv.obs.r
R/reflist.r
R/tv.site.r
R/tv.traits.r
R/internal.r
R/tax.r
R/zzz.r
R/tv.write.r
vignettes
vignettes/vegdata.Rnw
vignettes/googleVis.jpg
vignettes/veronica.png
vignettes/lib.bib
MD5
build
build/vignette.rds
DESCRIPTION
man
man/tv.coverperc.Rd
man/isc.Rd
man/syntab.Rd
man/monotypic.Rd
man/taxval.Rd
man/tv.site.Rd
man/vegdata-internal.Rd
man/vegdata-package.Rd
man/tv.traits.Rd
man/tv.veg.Rd
man/lc.Rd
man/elbaue.Rd
man/tv.obs.Rd
man/tax.Rd
man/vegetweb.Rd
man/tv.biblio.Rd
man/tv.write.Rd
man/tv.metadata.Rd
man/tv.comprefl.Rd
vegdata documentation built on May 20, 2017, 5:39 a.m.