fasta.read: Read fasta formate and convert it to data frame

In vhcub: Virus-Host Codon Usage Co-Adaptation Analysis

Description

Read fasta formate and convert it to data frame

Usage

fasta.read(virus.fasta,host.fasta)

Arguments

virus.fasta	directory path to the virus fasta file.
host.fasta	directory path to the host fasta file.

Value

A list with two data frames.

Note

The list with two data.frames; the first one for virus DNA sequences and the second one for the host.

Author(s)

Ali Mostafa Anwar [e-mail] and Mohmed Soudy [e-mail]

Examples

fasta <- fasta.read("virus.fasta", "host.fasta")
fasta.v <- fasta[[1]]
fasta.h <- fasta[[2]]

vhcub documentation built on Nov. 15, 2019, 5:10 p.m.