voxel: Mass-Univariate Voxelwise Analysis of Medical Imaging Data

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Functions for the mass-univariate voxelwise analysis of medical imaging data that follows the NIfTI <http://nifti.nimh.nih.gov> format.

Author
Angel Garcia de la Garza [aut, cre], Simon Vandekar [aut], David Roalf [aut], Kosha Ruparel [aut], Ruben Gur [aut], Raquel Gur [aut], Theodore Satterthwaite [aut], R. Taki Shinohara [aut]
Date of publication
2016-08-27 00:43:49
Maintainer
Angel Garcia de la Garza <agarciadlg@gmail.com>
License
GPL-2
Version
1.2.1
URLs

View on CRAN

Man pages

anovagammVoxel
Computes analysis of variance tables for a Generalized...
anovagamVoxel
Computes analysis of variance tables for a generalized...
anovalmerVoxel
Computes analysis of variance tables for linear mixed effect...
anovalmVoxel
Computes analysis of variance tables for linear model fits on...
gamCluster
Run a Generalized Additive Model on the mean intensity over a...
gammCluster
Run a Generalized Additive Mixed Effects Model on the mean...
gammNIfTI
Wrapper to run a Generalized Additive Mixed Effects model on...
gammVoxel
Run a Generalized Additive Mixed Effects Model on all voxels...
gamNIfTI
Wrapper to run a Generalized Additive model on a NIfTI image...
gamVoxel
Run a Generalized Additive Model on all voxels of a NIfTI...
listFormula
Create list of Formulas for each voxel
lmCluster
Run a Linear Model on the mean intensity over a region of...
lmerCluster
Run a Linear Mixed Effet Model on the mean intensity over a...
lmerNIfTI
Run a Linear Mixed Effet Model on a NIfTI image and output a...
lmerVoxel
Run a Linear Mixed Effet Model on all voxels of a NIfTI image...
lmNIfTI
Wrapper to run a model on a NIfTI image and output parametric...
lmVoxel
Run a Linear Model on all voxels of a NIfTI image within a...
mergeNiftis
Merge NIfTI Images across specified direction
parMap
Create parametric maps
plotGAM
GAM plotting using ggplot2
plotGAMM
GAMM plotting using ggplot2
ts2matrix
Timeseries to Matrix
ts2meanCluster
Timeseries to Mean Cluster
vgamm4Param
Run a Generalized Additive Mixed Effects Model on all voxels...
vgamParam
Run a Generalized Additive Model on all voxels of a NIfTI...
vlmerParam
Run a Linear Mixed Effects Model on all voxels of a NIfTI...
vlmParam
Run a Linear Model on all voxels of a NIfTI image within a...

Files in this package

voxel
voxel/NAMESPACE
voxel/NEWS.md
voxel/R
voxel/R/lmerNIfTI.R
voxel/R/anovalmerVoxel.R
voxel/R/anovagammVoxel.R
voxel/R/ts2matrix.R
voxel/R/lmCluster.R
voxel/R/parMap.R
voxel/R/plotGAMM.R
voxel/R/gamCluster.R
voxel/R/vgamParam.R
voxel/R/vgamm4Param.R
voxel/R/lmerVoxel.R
voxel/R/anovalmVoxel.R
voxel/R/plotGAM.R
voxel/R/gammVoxel.R
voxel/R/gamVoxel.R
voxel/R/gamNIfTI.R
voxel/R/gammCluster.R
voxel/R/vlmParam.R
voxel/R/ts2meanCluster.R
voxel/R/mergeNiftis.R
voxel/R/listFormula.R
voxel/R/vlmerParam.R
voxel/R/gammNIfTI.R
voxel/R/lmerCluster.R
voxel/R/lmNIfTI.R
voxel/R/anovagamVoxel.R
voxel/R/lmVoxel.R
voxel/MD5
voxel/DESCRIPTION
voxel/man
voxel/man/lmerVoxel.Rd
voxel/man/lmNIfTI.Rd
voxel/man/anovalmerVoxel.Rd
voxel/man/lmerCluster.Rd
voxel/man/anovalmVoxel.Rd
voxel/man/gamVoxel.Rd
voxel/man/vgamParam.Rd
voxel/man/gamNIfTI.Rd
voxel/man/listFormula.Rd
voxel/man/vlmerParam.Rd
voxel/man/vgamm4Param.Rd
voxel/man/ts2meanCluster.Rd
voxel/man/lmerNIfTI.Rd
voxel/man/gammNIfTI.Rd
voxel/man/lmVoxel.Rd
voxel/man/ts2matrix.Rd
voxel/man/lmCluster.Rd
voxel/man/gammVoxel.Rd
voxel/man/anovagammVoxel.Rd
voxel/man/mergeNiftis.Rd
voxel/man/vlmParam.Rd
voxel/man/gamCluster.Rd
voxel/man/parMap.Rd
voxel/man/plotGAM.Rd
voxel/man/anovagamVoxel.Rd
voxel/man/gammCluster.Rd
voxel/man/plotGAMM.Rd