wTO.aux.each: wTO.aux.each

In wTO: Computing Weighted Topological Overlaps (wTO) & Consensus wTO Network

wTO.aux.each

Description

wTO.aux.each calculate the wTO for each one of the resamplings.

Usage

wTO.aux.each(n, Data, Overlap, method, method_resampling, lag, ID)

Arguments

n	Number of bootstraps / reshuffles to be run for the estimates of the "Threshold" or "pval".
Data	data.frame containing the count / expression data for the correlation.
Overlap	Nodes of interested, where the Overlapping weights will be computed.
method	Type of the correlation that should be used. "s" / "spearman" will compute the rank spearman correlation, "p" / "pearson" will compute the linear correlation. If no value is given, the default is to use "s".
method_resampling	method of the resampling. Bootstrap or Reshuffle. Bootstrap null hypothesis is that the wTO is random, and Reshuffle tests if the wTO is equal to zero.

wTO documentation built on March 31, 2023, 6:31 p.m.