mle.cp: Mallows Cp

Description Usage Arguments Details Value Author(s) References Examples

View source: R/mle.cp.R

Description

The Mallows Cp is evaluated for each submodel.

Usage

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mle.cp(formula, data=list(), model=TRUE, x=FALSE, 
       y=FALSE, var.full=0, contrasts=NULL, verbose=FALSE)

Arguments

formula

a symbolic description of the model to be fit. The details of model specification are given below.

data

an optional data frame containing the variables in the model. By default the variables are taken from the environment which mle.cp is called from.

model, x, y

logicals. If TRUE the corresponding components of the fit (the model frame, the model matrix, the response).

var.full

the value of variance to be used in the denominator of the Mallows Cp, if 0 the variance estimated from the full model is used.

contrasts

an optional list. See the contrasts.arg of model.matrix.default.

verbose

if TRUE warnings are printed.

Details

Models for mle.cp are specified symbolically. A typical model has the form response ~ terms where response is the (numeric) response vector and terms is a series of terms which specifies a linear predictor for response. A terms specification of the form first+second indicates all the terms in first together with all the terms in second with duplicates removed. A specification of the form first:second indicates the the set of terms obtained by taking the interactions of all terms in first with all terms in second. The specification first*second indicates the cross of first and second. This is the same as first+second+first:second.

Value

mle.cp returns an object of class "mle.cp".

The function summary is used to obtain and print a summary of the results, only models below the bisector are reported. The generic accessor functions coefficients and residuals extract coefficients and residuals returned by mle.cp. The object returned by mle.cp are:

cp

Mallows Cp for each submodels

coefficients

the parameters estimator, one row vector for eac submodel.

scale

an estimation of the error scale, one value for each submodel.

residuals

the residuals from the estimated model, one column vector for each submodel.

call

the match.call().

contrasts
xlevels
terms

the model frame.

model

if model=TRUE a matrix with first column the dependent variable and the remain column the explanatory variables for the full model.

x

if x=TRUE a matrix with the explanatory variables for the full model.

y

if y=TRUE a vector with the dependent variable.

info

not well working yet, if 0 no error occurred.

Author(s)

Claudio Agostinelli

References

Mallows, C.L., (1973) Some comments on Cp, Technometrics, 15, 661-675.

Examples

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library(wle)

data(hald)

cor(hald)

result <- mle.cp(y.hald~x.hald)

summary(result)

plot(result)

Example output

Loading required package: circular

Attaching package: 'circular'

The following objects are masked from 'package:stats':

    sd, var

           [,1]       [,2]       [,3]       [,4]       [,5]
[1,]  1.0000000  0.7307175  0.8162526 -0.5346707 -0.8213050
[2,]  0.7307175  1.0000000  0.2285795 -0.8241338 -0.2454451
[3,]  0.8162526  0.2285795  1.0000000 -0.1392424 -0.9729550
[4,] -0.5346707 -0.8241338 -0.1392424  1.0000000  0.0295370
[5,] -0.8213050 -0.2454451 -0.9729550  0.0295370  1.0000000

Call:
mle.cp(formula = y.hald ~ x.hald)


Mallows Cp:
     (Intercept) x.hald1 x.hald2 x.hald3 x.hald4    cp
[1,]           1       1       1       0       0 2.678
[2,]           1       1       1       0       1 3.018
[3,]           1       1       1       1       0 3.041
[4,]           1       1       0       1       1 3.497
[5,]           0       1       1       1       1 3.793
[6,]           1       1       1       1       1 5.000

Printed the first  6  best models 

wle documentation built on May 29, 2017, 11:48 a.m.

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