dot-colorByPvalue: Colors based on p-Values

In wrGraph: Graphics in the Context of Analyzing High-Throughput Data

Colors based on p-Values

Description

This function helps defining color-gradient based on p-Values. This fuction requires package RColorBrewer being installed

Usage

.colorByPvalue(
  x,
  br = NULL,
  col = NULL,
  asIndex = FALSE,
  silent = FALSE,
  debug = FALSE,
  callFrom = NULL
)

Arguments

x	(numeric) p-values (main input)
br	(numeric) custom breaks (used with cut)
col	custom colors (must be of length(br) -1)
asIndex	(logical) custom breaks (used with cut)
silent	(logical) suppress messages
debug	(logical) supplemental messages for debugging
callFrom	(character) allow easier tracking of messages produced

Value

This function retruns a color-gradient based on p-Values

See Also

(for PCA) plotPCAw)

Examples

.colorByPvalue((1:10)/10)

wrGraph documentation built on Oct. 20, 2023, 5:08 p.m.