shortSoftwName: Get Short Names of Proteomics Quantitation Software

In wrProteo: Proteomics Data Analysis Functions

Get Short Names of Proteomics Quantitation Software

Description

Get/convert short names of various proteomics quantitation software names. A 2-letter abbreviation will be returned

Usage

shortSoftwName(
  x,
  tryAsLower = TRUE,
  silent = FALSE,
  debug = FALSE,
  callFrom = NULL
)

Arguments

x	(character) 'mono' or 'average'
tryAsLower	(logical)
silent	(logical) suppress messages
debug	(logical) additional messages for debugging
callFrom	(character) allow easier tracking of messages produced

Value

This function returns a vector with masses for all amino-acids (argument 'massTy' to switch from mono-isotopic to average mass)

See Also

massDeFormula, convToNum

Examples

shortSoftwName(c("maxquant","DIANN"))

wrProteo documentation built on April 12, 2025, 1:16 a.m.