alignBurstSeq | Align synced data with known burst sequence |
applySync | Apply sync model to toa matrix to obtain synced data |
checkInp | Check consistency of 'inp' object obtained from 'getInp()' |
checkInpSync | Check consistency of 'inp_sync' object obtained from... |
dat_align | Example data for showcasing yaps function alignBurstSeq() |
fineTuneSyncModel | Fine-tune an already fitted sync_model Wrapper function to... |
getBbox | Get a standard bounding box to impose spatial constraints |
getInp | Get prepared inp-object for use in TMB-call |
getInpSync | Get object inp for synchronization |
getSyncCoverage | Quick overview to check if all hydros have enough data within... |
getSyncModel | Get sync model from inp_sync object obtained by... |
getToaYaps | Build TOA matrix from synced data.table - also do some... |
plotBbox | Graphical representation of spatial constraints |
plotSyncModelCheck | Plot to check how well the sync model is working |
plotSyncModelHydros | Plot hydrophone positions. Especially useful if some hydro... |
plotSyncModelResids | Plot residuals of sync_model to enable check of model |
plotYaps | Basic plots of yaps output |
prepDetections | Experimental! Prepare detections data.table from raw data -... |
runYaps | Function to run TMB to estimate track |
simHydros | Sim hydrophone array configuration |
simTelemetryTrack | Simulate telemetry track based on known true track obtained... |
simToa | Sim TOA matrix for the supplied telemetryTrack |
simTrueTrack | Simulate a known movement track for subsequent estimation... |
ssu1 | Test data from Florida Bay |
tempToSs | Calculate speed of sound from water temperature, salinity and... |
testYaps | Test YAPS core functionality |
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