developer-helpers: Developer helpers

In yardstick: Tidy Characterizations of Model Performance

Developer helpers

Description

Helpers to be used alongside check_metric, yardstick_remove_missing and metric summarizers when creating new metrics. See Custom performance metrics for more information.

Usage

dots_to_estimate(data, ...)

get_weights(data, estimator)

finalize_estimator(
  x,
  estimator = NULL,
  metric_class = "default",
  call = caller_env()
)

finalize_estimator_internal(
  metric_dispatcher,
  x,
  estimator,
  call = caller_env()
)

validate_estimator(estimator, estimator_override = NULL, call = caller_env())

Arguments

data	A table with truth values as columns and predicted values as rows.
...	A set of unquoted column names or one or more dplyr selector functions to choose which variables contain the class probabilities. If truth is binary, only 1 column should be selected, and it should correspond to the value of event_level. Otherwise, there should be as many columns as factor levels of truth and the ordering of the columns should be the same as the factor levels of truth.
estimator	Either NULL for auto-selection, or a single character for the type of estimator to use.
x	The column used to autoselect the estimator. This is generally the truth column, but can also be a table if your metric has table methods.
metric_class	A single character of the name of the metric to autoselect the estimator for. This should match the method name created for finalize_estimator_internal().
call	The execution environment of a currently running function, e.g. caller_env(). The function will be mentioned in error messages as the source of the error. See the call argument of abort() for more information.
metric_dispatcher	A simple dummy object with the class provided to metric_class. This is created and passed along for you.
estimator_override	A character vector overriding the default allowed estimator list of c("binary", "macro", "micro", "macro_weighted"). Set this if your classification estimator does not support all of these methods.

Dots -> Estimate

dots_to_estimate() is useful with class probability metrics that take ... rather than estimate as an argument. It constructs either a single name if 1 input is provided to ... or it constructs a quosure where the expression constructs a matrix of as many columns as are provided to .... These are eventually evaluated in the summarise() call in metric-summarizers and evaluate to either a vector or a matrix for further use in the underlying vector functions.

Weight Calculation

get_weights() accepts a confusion matrix and an estimator of type "macro", "micro", or "macro_weighted" and returns the correct weights. It is useful when creating multiclass metrics.

Estimator Selection

finalize_estimator() is the engine for auto-selection of estimator based on the type of x. Generally x is the truth column. This function is called from the vector method of your metric.

finalize_estimator_internal() is an S3 generic that you should extend for your metric if it does not implement only the following estimator types: "binary", "macro", "micro", and "macro_weighted". If your metric does support all of these, the default version of finalize_estimator_internal() will autoselect estimator appropriately. If you need to create a method, it should take the form: finalize_estimator_internal.metric_name. Your method for finalize_estimator_internal() should do two things:

1. If estimator is NULL, autoselect the estimator based on the type of x and return a single character for the estimator.

2. If estimator is not NULL, validate that it is an allowed estimator for your metric and return it.

If you are using the default for finalize_estimator_internal(), the estimator is selected using the following heuristics:

1. If estimator is not NULL, it is validated and returned immediately as no auto-selection is needed.

2. If x is a:

   • factor - Then "binary" is returned if it has 2 levels, otherwise "macro" is returned.

   • numeric - Then "binary" is returned.

   • table - Then "binary" is returned if it has 2 columns, otherwise "macro" is returned. This is useful if you have table methods.

   • matrix - Then "macro" is returned.

Estimator Validation

validate_estimator() is called from your metric specific method of finalize_estimator_internal() and ensures that a user provided estimator is of the right format and is one of the allowed values.

See Also

metric-summarizers check_metric yardstick_remove_missing

yardstick documentation built on June 22, 2024, 7:07 p.m.