Man pages for zetadiv
Functions to Compute Compositional Turnover Using Zeta Diversity
| bird.env.coarse | South-East Australia Environmental Dataset at Coarse Scale |
| bird.env.fine | South-East Australia Environmental Dataset at Fine Scale |
| bird.spec.coarse | Australia Bird Atlas Species Occurrence Dataset at Coarse... |
| bird.spec.fine | Australia Bird Atlas Species Occurrence Dataset at Fine Scale... |
| glm.cons | Fitting Generalized Linear Models with constraint on the... |
| glm.fit.cons | Generalized Linear Models fitting method with negative... |
| Ispline | Transform data using I-splines |
| Marion.env | Marion Island Environmental Dataset |
| Marion.species | Marion Island Species Presence-Absence Dataset |
| pie.neg | Pie Chart, considering negative values as zeros |
| Plot.ispline | Plots I-splines for Multi-Site Generalised Dissimilarity... |
| Plot.zeta.ddecay | Zeta distance-decay plotting |
| Plot.zeta.ddecays | Zeta distance-decay plotting for multiple orders |
| Plot.zeta.decline | Zeta diversity decline plotting |
| Plot.zeta.scale.min.dist | Plotting of zeta diversity scaling with sample grain... |
| Plot.zeta.scale.regular | Plotting of zeta diversity scaling with sample grain using... |
| Predict.msgdm | Predict zeta values for new environmental and distance data |
| Reg.ispline | Perform an I-spline regression |
| rescale.min.dist | Rescaling of data based on the minimum distance between sites |
| rescale.regular | Rescaling of data following a hierarchical increase in grain... |
| Return.ispline | Computing splines coordinates from I-spline-based multi-site... |
| Zeta.ddecay | Zeta distance decay for a specific number of assemblages or... |
| Zeta.ddecays | Zeta distance decay for a range of numbers of assemblages or... |
| Zeta.decline.ex | Expectation of zeta diversity decline |
| Zeta.decline.mc | Zeta diversity decline using Monte Carlo sampling |
| Zeta.msgdm | Multi-site generalised dissimilarity modelling for a set of... |
| Zeta.order.ex | Expectation of zeta diversity for a specific number of... |
| Zeta.order.mc | Zeta diversity for a specific number of assemblages or sites... |
| Zeta.order.mc.mult | Number of species in common between a specific number of... |
| Zeta.sam.sensitivity | Sensitivity analysis for the sample size of zeta |
| Zeta.scale.min.dist | Zeta diversity scaling with sample grain dependency based on... |
| Zeta.scale.regular | Zeta diversity scaling with sample grain using hierarchical... |
| Zeta.varpart | Variation partitioning for zeta diversity |
