Files in 1156054203/circlize-
Circular Visualization
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/chordDiagram.R
R/circos.arrow.R
R/circos.nested.R
R/genomic.R
R/genomic_utils.R
R/global.R
R/link.R
R/overview.R
R/plot.R
R/random_color.R
R/raster.R
R/regions.R
R/utils.R
R/zzz.R
README.md
demo/00Index
demo/foo.R
example/doodle.pdf
inst/CITATION
inst/extdata/DMR.RData
inst/extdata/Rlogo.png
inst/extdata/bird.orders.RData
inst/extdata/chromInfo.txt
inst/extdata/chrom_info_list.rds
inst/extdata/cytoBand.txt
inst/extdata/cytoband_list.rds
inst/extdata/doodle.RData
inst/extdata/download_and_slice_doodle.R
inst/extdata/download_ucsc.R
inst/extdata/tagments_WGBS_DMR.RData
inst/extdata/tp_family.RData
inst/extdata/tp_family_df.rds
man/CELL_META.rd
man/Subset.CELL_META.rd
man/add_transparency.rd
man/adjacencyList2Matrix.rd
man/chordDiagram.rd
man/chordDiagramFromDataFrame.rd
man/chordDiagramFromMatrix.rd
man/circlize-package.rd
man/circlize.rd
man/circos.arrow.rd
man/circos.axis.rd
man/circos.clear.rd
man/circos.dendrogram.rd
man/circos.genomicDensity.rd
man/circos.genomicHeatmap.rd
man/circos.genomicIdeogram.rd
man/circos.genomicInitialize.rd
man/circos.genomicLabels.rd
man/circos.genomicLines.rd
man/circos.genomicLink.rd
man/circos.genomicPoints.rd
man/circos.genomicPosTransformLines.rd
man/circos.genomicRainfall.rd
man/circos.genomicRect.rd
man/circos.genomicText.rd
man/circos.genomicTrack.rd
man/circos.genomicTrackPlotRegion.rd
man/circos.info.rd
man/circos.initialize.rd
man/circos.initializeWithIdeogram.rd
man/circos.lines.rd
man/circos.link.rd
man/circos.nested.rd
man/circos.par.rd
man/circos.points.rd
man/circos.polygon.rd
man/circos.raster.rd
man/circos.rect.rd
man/circos.segments.rd
man/circos.text.rd
man/circos.track.rd
man/circos.trackHist.rd
man/circos.trackLines.rd
man/circos.trackPlotRegion.rd
man/circos.trackPoints.rd
man/circos.trackText.rd
man/circos.update.rd
man/circos.updatePlotRegion.rd
man/circos.xaxis.rd
man/circos.yaxis.rd
man/col2value.rd
man/colorRamp2.rd
man/convert_height.rd
man/convert_length.rd
man/convert_x.rd
man/convert_y.rd
man/cytoband.col.rd
man/degree.rd
man/draw.sector.rd
man/fontsize.rd
man/generateRandomBed.rd
man/genomicDensity.rd
man/get.all.sector.index.rd
man/get.all.track.index.rd
man/get.cell.meta.data.rd
man/get.current.chromosome.rd
man/get.current.sector.index.rd
man/get.current.track.index.rd
man/getI.rd
man/highlight.chromosome.rd
man/highlight.sector.rd
man/posTransform.default.rd
man/posTransform.text.rd
man/print.CELL_META.rd
man/rainfallTransform.rd
man/rand_color.rd
man/read.chromInfo.rd
man/read.cytoband.rd
man/reverse.circlize.rd
man/set.current.cell.rd
man/show.index.rd
man/smartAlign.rd
man/uh.rd
man/ux.rd
man/uy.rd
test/01.test_circos.par.R
test/02.test_circos.initialize.R
test/03.test_circlize.R
test/04.test_degree_calculate.R
test/05.test_lines.expand.R
test/06.test_polar2Cartesian.R
test/07.test_recycle.R
test/08.test_rotate.parabola.R
test/09.test_check_position.R
test/10.test.arc.points.R
test/11.test_circos.trackPlotRegion.R
test/12.test_circos.points.R
test/13.test_circos.lines.R
test/14.test_circos.text.R
test/15.test_circos.rect.R
test/16.test_circos.polygon.R
test/17.test_circos.axis.R
test/18.test_circos.link.R
test/19.test.circos.trackHist.R
test/20.test_draw.sector.R
test/21.test_get.cell.meta.data.R
test/22.test_others.R
test/23.test_chordDiagram.R
test/genomic_functions/normalizeToDataFrame.R
test/genomic_functions/test_genomicDensity.R
test/genomic_functions/test_genomicLines.R
test/genomic_functions/test_genomicLink.R
test/genomic_functions/test_genomicPoints.R
test/genomic_functions/test_genomicRect.R
test/genomic_functions/test_genomicText.R
test/genomic_functions/test_genomic_initialize.R
test/genomic_functions/test_genomic_rainfall.R
test/genomic_functions/test_highlight.chromosome.R
test/genomic_functions/test_posTransformLines.R
test/genomic_functions/test_region.R
test/genomic_functions/to-do.txt
test/relation-01-chordDiagram.R
vignettes/circlize.Rmd
