get.SYMBOL: Get Hugo gene symbols and ensembl gene identifiers
In AEBilgrau/Bmisc: Biostatistical miscellaneous functions
Description
Usage
Arguments
Value
Author(s)
Description
These functions uses biomaRt to get gene symbols and ensembl gene identifies
for an ExpressionSet object.
Usage
1
get.SYMBOL(es, subset = featureNames(es), attributes = NULL, ...)
Arguments
es
in an ExpressionSet object
subset
is a character vector of feature names.
attributes
other attributes to extract. A possible list of attributes
can be retrieved using the function listAttributes.
...
arguments passed to getBM.
Value
a data.frame with columns corresponding to the matched gene identifiers.
Author(s)
Anders Ellern Bilgrau <anders.ellern.bilgrau (at) gmail.com>
AEBilgrau/Bmisc documentation built on May 5, 2019, 11:28 a.m.
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Description Usage Arguments Value Author(s)
Description
These functions uses biomaRt to get gene symbols and ensembl gene identifies for an ExpressionSet object.
Usage
1 | get.SYMBOL(es, subset = featureNames(es), attributes = NULL, ...)
|
Arguments
es |
in an ExpressionSet object |
subset |
is a character vector of feature names. |
attributes |
other attributes to extract. A possible list of attributes
can be retrieved using the function |
... |
arguments passed to |
Value
a data.frame with columns corresponding to the matched gene identifiers.
Author(s)
Anders Ellern Bilgrau <anders.ellern.bilgrau (at) gmail.com>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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