writeForNetsTensor: Format a list of networks for the "NetsTensor" software.
In AEBilgrau/Bmisc: Biostatistical miscellaneous functions
Description
Usage
Arguments
Value
Note
References
Description
This function formats the networks for the "NetTensor" software by Li et. al.
(see references below) and writes the result to the harddrive.
Usage
1
writeForNetsTensor(x.list, out.dir = "netsdata", verbose = TRUE)
Arguments
x.list
A list of matrices of the same size
out.dir
character. The path to the output dir where the files are to
be written.
verbose
logical. Should the progress be outputted?
Value
Returns invisibly a list of length 4 with the content of the
written files. Writes the formatted networks to
the disk in the directory specified by out.dir.
Note
The software is available at the website
http://zhoulab.usc.edu/tensor/.
References
Li, W., Liu, C. C., Zhang, T., Li, H., Waterman, M. S., & Zhou, X. J.
(2011). Integrative analysis of many weighted co-expression networks using
tensor computation. PLoS computational biology, 7(6), e1001106.
AEBilgrau/Bmisc documentation built on May 5, 2019, 11:28 a.m.
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Description Usage Arguments Value Note References
Description
This function formats the networks for the "NetTensor" software by Li et. al. (see references below) and writes the result to the harddrive.
Usage
1 | writeForNetsTensor(x.list, out.dir = "netsdata", verbose = TRUE)
|
Arguments
x.list |
A list of matrices of the same size |
out.dir |
character. The path to the output dir where the files are to be written. |
verbose |
logical. Should the progress be outputted? |
Value
Returns invisibly a list of length 4 with the content of the
written files. Writes the formatted networks to
the disk in the directory specified by out.dir.
Note
The software is available at the website http://zhoulab.usc.edu/tensor/.
References
Li, W., Liu, C. C., Zhang, T., Li, H., Waterman, M. S., & Zhou, X. J. (2011). Integrative analysis of many weighted co-expression networks using tensor computation. PLoS computational biology, 7(6), e1001106.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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