writeForNetsTensor: Format a list of networks for the "NetsTensor" software.

Description Usage Arguments Value Note References

View source: R/writeForNetsTensor.R

Description

This function formats the networks for the "NetTensor" software by Li et. al. (see references below) and writes the result to the harddrive.

Usage

1
writeForNetsTensor(x.list, out.dir = "netsdata", verbose = TRUE)

Arguments

x.list

A list of matrices of the same size

out.dir

character. The path to the output dir where the files are to be written.

verbose

logical. Should the progress be outputted?

Value

Returns invisibly a list of length 4 with the content of the written files. Writes the formatted networks to the disk in the directory specified by out.dir.

Note

The software is available at the website http://zhoulab.usc.edu/tensor/.

References

Li, W., Liu, C. C., Zhang, T., Li, H., Waterman, M. S., & Zhou, X. J. (2011). Integrative analysis of many weighted co-expression networks using tensor computation. PLoS computational biology, 7(6), e1001106.


AEBilgrau/Bmisc documentation built on Jan. 17, 2019, 10:10 a.m.