Files in AEBilgrau/DLBCLdata
Automated and reproducible download and preprocessing of DLBCL data
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
DLBCLdata.Rproj
NAMESPACE
R/DLBCLdata-package.R
R/auxiliary_brainarray.R
R/auxiliary_functions.R
R/cleanMetadata.GSE10846.R
R/cleanMetadata.GSE11318.R
R/cleanMetadata.GSE31312.R
R/cleanMetadata.GSE34171.R
R/cleanMetadata.GSE56315.R
R/cleanMetadata.R
R/downloadAndPrepareCELFiles.R
R/downloadAndPrepareMetadata.R
R/downloadAndProcessDLBCL.R
R/downloadAndProcessGEO.R
R/getLatestVersion.R
R/is.cleanedMetadata.R
R/listTargets.R
R/preprocessCELFiles.R
R/readBrainarrayTable.R
R/readDACData.R
R/requireBrainarray.R
README.md
data/DLBCL_overview.txt
inst/CITATION
inst/NEWS.Rd
inst/extdata/predictions-GSE10846-CHOP.txt
inst/extdata/predictions-GSE10846-RCHOP.txt
inst/extdata/predictions-GSE12195.txt
inst/extdata/predictions-GSE19246.txt
inst/extdata/predictions-GSE22470.txt
inst/extdata/predictions-GSE22895.txt
inst/extdata/predictions-GSE31312.txt
inst/extdata/predictions-GSE34171-hgu133a.txt
inst/extdata/predictions-GSE34171-hgu133b.txt
inst/extdata/predictions-GSE34171-hgu133plus2.txt
inst/extdata/predictions-GSE4475.txt
inst/extdata/predictions-GSE56315.txt
inst/tests/test-downloadAndProcessGEO.R
inst/tests/test-readDACData.R
inst/tests/test-testthat.R
man/DLBCL_overview.Rd
man/DLBCLdata-package.Rd
man/basenameSansCEL.Rd
man/cleanMetadata.Rd
man/downloadAndPrepareCELFiles.Rd
man/downloadAndPrepareMetadata.Rd
man/downloadAndProcessDLBCL.Rd
man/downloadAndProcessGEO.Rd
man/getLatestVersion.Rd
man/listTargets.Rd
man/listVersions.Rd
man/preprocessCELFiles.Rd
man/readBrainarrayTable.Rd
man/readDACData.Rd
man/requireBrainarray.Rd
tests/test-all.R
