stopifnot(require(knitr)) options(width = 90) knitr::opts_chunk$set( collapse = TRUE, comment = "#>", fig.path = "man/figures/", out.width = "100%" )
version <- as.vector(read.dcf("DESCRIPTION")[, "Version"]) version <- gsub("-", ".", version)
bayesnec
is a toxicity estimate and No-Effect toxicity estimation package that uses
brms
to fit
concentration(dose)-response data using Bayesian methods for the purpose of
estimating both ECX values, but more particularly 'NEC' (see Fox (2010),
'NSEC' (see Fisher and Fox (2023)), and 'N(S)EC (see Fisher et al. (2023)). Please see ?bnec
for a
more detailed help file.
To install the latest release version from CRAN use
install.packages("bayesnec")
The current development version can be downloaded from GitHub via
if (!requireNamespace("remotes")) { install.packages("remotes") } remotes::install_github("open-aims/bayesnec", ref = "dev")
Because bayesnec
is based on brms
and Stan, a C++
compiler is required. The program
Rtools comes with a C++
compiler for Windows. On Mac, you should install Xcode. See the prerequisites
section on this
link
for further instructions on how to get the compilers running.
Usage and further information about bayesnec
can be seen on the project
page and the
vignettes. Help files for the
individual functions can be found on the
reference page.
bayesnec
is provided by the
Australian Institute of Marine Science under the
GPL-2 License (GPL-2).
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